rs6927022
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs6927022(A;A) |
| Make rs6927022(A;G) |
| Make rs6927022(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 32644620 |
| Gene | HLA-DQA1, LOC107986589 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6927022 |
| dbSNP (classic) | rs6927022 |
| ClinGen | rs6927022 |
| ebi | rs6927022 |
| HLI | rs6927022 |
| Exac | rs6927022 |
| Gnomad | rs6927022 |
| Varsome | rs6927022 |
| LitVar | rs6927022 |
| Map | rs6927022 |
| PheGenI | rs6927022 |
| Biobank | rs6927022 |
| 1000 genomes | rs6927022 |
| hgdp | rs6927022 |
| ensembl | rs6927022 |
| geneview | rs6927022 |
| scholar | rs6927022 |
| rs6927022 | |
| pharmgkb | rs6927022 |
| gwascentral | rs6927022 |
| openSNP | rs6927022 |
| 23andMe | rs6927022 |
| SNPshot | rs6927022 |
| SNPdbe | rs6927022 |
| MSV3d | rs6927022 |
| GWAS Ctlg | rs6927022 |
| GMAF | 0.3604 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23128233 ]
|
| Trait | Ulcerative colitis |
| Title | Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. |
| Risk Allele | A |
| P-val | 5E-133 |
| Odds Ratio | 1.44 [1.387-1.503] |
[PMID 18438406] Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease.
[PMID 19143815] MHC fine mapping of human type 1 diabetes using the T1DGC data.
[PMID 19143817] Effect of linkage status of affected sib-pairs on the search for novel type 1 diabetes susceptibility genes in the HLA complex.
[PMID 19143821] Association of MHC SNP genotype with susceptibility to type 1 diabetes: a modified survival approach.
