rs7147705
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs7147705(C;C) |
| Make rs7147705(C;T) |
| Make rs7147705(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 14 |
| Position | 79535753 |
| Gene | NRXN3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs7147705 |
| dbSNP (classic) | rs7147705 |
| ClinGen | rs7147705 |
| ebi | rs7147705 |
| HLI | rs7147705 |
| Exac | rs7147705 |
| Gnomad | rs7147705 |
| Varsome | rs7147705 |
| LitVar | rs7147705 |
| Map | rs7147705 |
| PheGenI | rs7147705 |
| Biobank | rs7147705 |
| 1000 genomes | rs7147705 |
| hgdp | rs7147705 |
| ensembl | rs7147705 |
| geneview | rs7147705 |
| scholar | rs7147705 |
| rs7147705 | |
| pharmgkb | rs7147705 |
| gwascentral | rs7147705 |
| openSNP | rs7147705 |
| 23andMe | rs7147705 |
| SNPshot | rs7147705 |
| SNPdbe | rs7147705 |
| MSV3d | rs7147705 |
| GWAS Ctlg | rs7147705 |
| GMAF | 0.4233 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22959728 ]
|
| Trait | Amyotrophic lateral sclerosis (age of onset) |
| Title | Age of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1. |
| Risk Allele | T |
| P-val | 6E-6 |
| Odds Ratio | NR NR |
Gene NRXN3 Minor allele T MAF (case) 0.29 Joint P-value 4.83E-05 (a) Meta P—value 6.24E-06 (a) P-value Rank 35 AA 58.12±0.27 Aa 57.15±0.31 aa 55.26±0.65 From the “Supplemental Table S10 Top 2,000 SNPs associations with age of ALS onset, adjusting for first two principal component and center.”
