rs74556809
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (;) | 0 | common in clinvar |
| (-;-) | 0 | common in clinvar |
| (ATG;ATG) | 0 | common in clinvar |
| Make rs74556809(-;GAT) |
| Make rs74556809(GAT;GAT) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 48467255 |
| Gene | TREX1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs74556809 |
| dbSNP (classic) | rs74556809 |
| ClinGen | rs74556809 |
| ebi | rs74556809 |
| HLI | rs74556809 |
| Exac | rs74556809 |
| Gnomad | rs74556809 |
| Varsome | rs74556809 |
| LitVar | rs74556809 |
| Map | rs74556809 |
| PheGenI | rs74556809 |
| Biobank | rs74556809 |
| 1000 genomes | rs74556809 |
| hgdp | rs74556809 |
| ensembl | rs74556809 |
| geneview | rs74556809 |
| scholar | rs74556809 |
| rs74556809 | |
| pharmgkb | rs74556809 |
| gwascentral | rs74556809 |
| openSNP | rs74556809 |
| 23andMe | rs74556809 |
| SNPshot | rs74556809 |
| SNPdbe | rs74556809 |
| MSV3d | rs74556809 |
| GWAS Ctlg | rs74556809 |
| Merged from | Rs606231142 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | Rs74556809(ATG;ATG) rs74556809(GAT;GAT) rs74556809(TGA;TGA) |
| Alt | Rs74556809(ATG;ATG) rs74556809(GAT;GAT) rs74556809(TGA;TGA) |
| Reference | Rs74556809(-;-) |
| Significance | Pathogenic |
| Disease | Aicardi Goutieres syndrome 1 |
| Variation | info |
| Gene | ATRIP TREX1 |
| CLNDBN | Aicardi Goutieres syndrome 1 |
| Reversed | 0 |
| HGVS | NC_000003.11:g.48508653_48508655dupATG |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000004399.6, |
[PMID 16845398] Mutations in the gene encoding the 3'-5' DNA exonuclease TREX1 cause Aicardi-Goutieres syndrome at the AGS1 locus.
