rs748573754
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | carrier of one Krabbe disease allele |
(T;T) | 6 | Krabbe disease (likely) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 14 |
Position | 87945566 |
Gene | GALC |
is a | snp |
is | mentioned by |
dbSNP | rs748573754 |
dbSNP (classic) | rs748573754 |
ClinGen | rs748573754 |
ebi | rs748573754 |
HLI | rs748573754 |
Exac | rs748573754 |
Gnomad | rs748573754 |
Varsome | rs748573754 |
LitVar | rs748573754 |
Map | rs748573754 |
PheGenI | rs748573754 |
Biobank | rs748573754 |
1000 genomes | rs748573754 |
hgdp | rs748573754 |
ensembl | rs748573754 |
geneview | rs748573754 |
scholar | rs748573754 |
rs748573754 | |
pharmgkb | rs748573754 |
gwascentral | rs748573754 |
openSNP | rs748573754 |
23andMe | rs748573754 |
SNPshot | rs748573754 |
SNPdbe | rs748573754 |
MSV3d | rs748573754 |
GWAS Ctlg | rs748573754 |
Max Magnitude | 6 |
aka c.1657G>A, p.Gly553Arg
Identified in ClinVar as likely pathogenic for Krabbe disease (when inherited in two copies or as a compound heterozygote)
ClinVar | |
---|---|
Risk | Rs748573754(T;T) |
Alt | Rs748573754(T;T) |
Reference | Rs748573754(C;C) |
Significance | Probable-Pathogenic |
Disease | Galactosylceramide beta-galactosidase deficiency |
Variation | info |
Gene | GALC |
CLNDBN | Galactosylceramide beta-galactosidase deficiency |
Reversed | 0 |
HGVS | NC_000014.8:g.88411910C>T |
CLNSRC | |
CLNACC | RCV000169525.1, |