rs749893889
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 6 | Krabbe disease (likely) |
(A;G) | 3 | carrier of one Krabbe disease allele |
(G;G) | 0 | common in clinvar |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 14 |
Position | 87945632 |
Gene | GALC |
is a | snp |
is | mentioned by |
dbSNP | rs749893889 |
dbSNP (classic) | rs749893889 |
ClinGen | rs749893889 |
ebi | rs749893889 |
HLI | rs749893889 |
Exac | rs749893889 |
Gnomad | rs749893889 |
Varsome | rs749893889 |
LitVar | rs749893889 |
Map | rs749893889 |
PheGenI | rs749893889 |
Biobank | rs749893889 |
1000 genomes | rs749893889 |
hgdp | rs749893889 |
ensembl | rs749893889 |
geneview | rs749893889 |
scholar | rs749893889 |
rs749893889 | |
pharmgkb | rs749893889 |
gwascentral | rs749893889 |
openSNP | rs749893889 |
23andMe | rs749893889 |
SNPshot | rs749893889 |
SNPdbe | rs749893889 |
MSV3d | rs749893889 |
GWAS Ctlg | rs749893889 |
Max Magnitude | 6 |
aka c.1591C>T, p.Arg531Cys
Identified in ClinVar as likely pathogenic for Krabbe disease (when inherited in two copies or as a compound heterozygote)
ClinVar | |
---|---|
Risk | Rs749893889(A;A) |
Alt | Rs749893889(A;A) |
Reference | Rs749893889(G;G) |
Significance | Probable-Pathogenic |
Disease | Galactosylceramide beta-galactosidase deficiency |
Variation | info |
Gene | GALC |
CLNDBN | Galactosylceramide beta-galactosidase deficiency |
Reversed | 0 |
HGVS | NC_000014.8:g.88411976G>A |
CLNSRC | |
CLNACC | RCV000169377.1, |