rs75391579
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (A;G) | 3 | Carrier of a GALT gene mutation |
| (G;G) | 8 | Galactosemia (predicted); see discussion |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 34648170 |
| Gene | GALT |
| is a | snp |
| is | mentioned by |
| dbSNP | rs75391579 |
| dbSNP (classic) | rs75391579 |
| ClinGen | rs75391579 |
| ebi | rs75391579 |
| HLI | rs75391579 |
| Exac | rs75391579 |
| Gnomad | rs75391579 |
| Varsome | rs75391579 |
| LitVar | rs75391579 |
| Map | rs75391579 |
| PheGenI | rs75391579 |
| Biobank | rs75391579 |
| 1000 genomes | rs75391579 |
| hgdp | rs75391579 |
| ensembl | rs75391579 |
| geneview | rs75391579 |
| scholar | rs75391579 |
| rs75391579 | |
| pharmgkb | rs75391579 |
| gwascentral | rs75391579 |
| openSNP | rs75391579 |
| 23andMe | rs75391579 |
| SNPshot | rs75391579 |
| SNPdbe | rs75391579 |
| MSV3d | rs75391579 |
| GWAS Ctlg | rs75391579 |
| GMAF | 0.001377 |
| Max Magnitude | 8 |
rs75391579, also known as c.563A>G, p.Gln188Arg and Q188R, represents a variant in the GALT gene on chromosome 9.
The rs75391579(G) allele is considered a pathogenic mutation associated with galactosemia, a recessively inherited disorder typically first diagnosed in newborns. This mutation has been reported as one of the most frequently occurring GALT gene mutations in the US and in some European/Caucasian populations.
23andMe name: i5002979
| ClinVar | |
|---|---|
| Risk | Rs75391579(G;G) |
| Alt | Rs75391579(G;G) |
| Reference | Rs75391579(A;A) |
| Significance | Pathogenic |
| Disease | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
| Variation | info |
| Gene | GALT |
| CLNDBN | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
| Reversed | 0 |
| HGVS | NC_000009.11:g.34648167A>G |
| CLNSRC | HGMD OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000003798.6, RCV000185917.3, |
[PMID 16838075] Classical galactosaemia revisited.
