rs75391579
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;G) | 3 | Carrier of a GALT gene mutation |
(G;G) | 8 | Galactosemia (predicted); see discussion |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 34648170 |
Gene | GALT |
is a | snp |
is | mentioned by |
dbSNP | rs75391579 |
dbSNP (classic) | rs75391579 |
ClinGen | rs75391579 |
ebi | rs75391579 |
HLI | rs75391579 |
Exac | rs75391579 |
Gnomad | rs75391579 |
Varsome | rs75391579 |
LitVar | rs75391579 |
Map | rs75391579 |
PheGenI | rs75391579 |
Biobank | rs75391579 |
1000 genomes | rs75391579 |
hgdp | rs75391579 |
ensembl | rs75391579 |
geneview | rs75391579 |
scholar | rs75391579 |
rs75391579 | |
pharmgkb | rs75391579 |
gwascentral | rs75391579 |
openSNP | rs75391579 |
23andMe | rs75391579 |
SNPshot | rs75391579 |
SNPdbe | rs75391579 |
MSV3d | rs75391579 |
GWAS Ctlg | rs75391579 |
GMAF | 0.001377 |
Max Magnitude | 8 |
rs75391579, also known as c.563A>G, p.Gln188Arg and Q188R, represents a variant in the GALT gene on chromosome 9.
The rs75391579(G) allele is considered a pathogenic mutation associated with galactosemia, a recessively inherited disorder typically first diagnosed in newborns. This mutation has been reported as one of the most frequently occurring GALT gene mutations in the US and in some European/Caucasian populations.
23andMe name: i5002979
ClinVar | |
---|---|
Risk | Rs75391579(G;G) |
Alt | Rs75391579(G;G) |
Reference | Rs75391579(A;A) |
Significance | Pathogenic |
Disease | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
Variation | info |
Gene | GALT |
CLNDBN | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
Reversed | 0 |
HGVS | NC_000009.11:g.34648167A>G |
CLNSRC | HGMD OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000003798.6, RCV000185917.3, |
[PMID 16838075] Classical galactosaemia revisited.