rs7582141
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| Make rs7582141(G;T) |
| Make rs7582141(T;T) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 2 |
| Position | 159042977 |
| Gene | TANC1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs7582141 |
| dbSNP (classic) | rs7582141 |
| ClinGen | rs7582141 |
| ebi | rs7582141 |
| HLI | rs7582141 |
| Exac | rs7582141 |
| Gnomad | rs7582141 |
| Varsome | rs7582141 |
| LitVar | rs7582141 |
| Map | rs7582141 |
| PheGenI | rs7582141 |
| Biobank | rs7582141 |
| 1000 genomes | rs7582141 |
| hgdp | rs7582141 |
| ensembl | rs7582141 |
| geneview | rs7582141 |
| scholar | rs7582141 |
| rs7582141 | |
| pharmgkb | rs7582141 |
| gwascentral | rs7582141 |
| openSNP | rs7582141 |
| 23andMe | rs7582141 |
| SNPshot | rs7582141 |
| SNPdbe | rs7582141 |
| MSV3d | rs7582141 |
| GWAS Ctlg | rs7582141 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 24974847] |
| Trait | Response to radiotherapy in prostate cancer (toxicity) |
| Title | A three-stage genome-wide association study identifies a susceptibility locus for late radiotherapy toxicity at 2q24.1. |
| Risk Allele | T |
| P-val | 5E-11 |
| Odds Ratio | .37 [NR] unit increase |
| ClinVar | |
|---|---|
| Risk | rs7582141(T;T) |
| Alt | rs7582141(T;T) |
| Reference | Rs7582141(G;G) |
| Significance | Drug-response |
| Disease | radiotherapy response - Toxicity/ADR |
| Variation | info |
| Gene | TANC1 |
| CLNDBN | radiotherapy response - Toxicity/ADR |
| Reversed | 0 |
| HGVS | NC_000002.11:g.159899489G>T |
| CLNSRC | PharmGKB Clinical Annotation |
| CLNACC | RCV000211418.1, |
