rs771489305
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6 | Krabbe disease (likely) |
(-;T) | 3 | carrier of one Krabbe disease allele |
(T;T) | 0 | common in clinvar |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 14 |
Position | 87947745 |
Gene | GALC |
is a | snp |
is | mentioned by |
dbSNP | rs771489305 |
dbSNP (classic) | rs771489305 |
ClinGen | rs771489305 |
ebi | rs771489305 |
HLI | rs771489305 |
Exac | rs771489305 |
Gnomad | rs771489305 |
Varsome | rs771489305 |
LitVar | rs771489305 |
Map | rs771489305 |
PheGenI | rs771489305 |
Biobank | rs771489305 |
1000 genomes | rs771489305 |
hgdp | rs771489305 |
ensembl | rs771489305 |
geneview | rs771489305 |
scholar | rs771489305 |
rs771489305 | |
pharmgkb | rs771489305 |
gwascentral | rs771489305 |
openSNP | rs771489305 |
23andMe | rs771489305 |
SNPshot | rs771489305 |
SNPdbe | rs771489305 |
MSV3d | rs771489305 |
GWAS Ctlg | rs771489305 |
Max Magnitude | 6 |
aka c.1472delA, p.Lys491Argfs
Identified in ClinVar as pathogenic for Krabbe disease (when inherited in two copies or as a compound heterozygote)
ClinVar | |
---|---|
Risk | Rs771489305(-;-) |
Alt | Rs771489305(-;-) |
Reference | Rs771489305(T;T) |
Significance | Pathogenic |
Disease | Galactosylceramide beta-galactosidase deficiency |
Variation | info |
Gene | GALC |
CLNDBN | Galactosylceramide beta-galactosidase deficiency |
Reversed | 0 |
HGVS | NC_000014.8:g.88414089delT |
CLNSRC | |
CLNACC | RCV000169172.1, |