rs778653296
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 7.8 | Schwartz Jampel syndrome type 1 |
(A;C) | 3 | Carrier for a Schwartz Jampel syndrome mutation |
(C;C) | 0 | common in clinvar |
Reference | GRCh38.p7 38.3/149 |
Chromosome | 1 |
Position | 21851790 |
Gene | HSPG2 |
is a | snp |
is | mentioned by |
dbSNP | rs778653296 |
dbSNP (classic) | rs778653296 |
ClinGen | rs778653296 |
ebi | rs778653296 |
HLI | rs778653296 |
Exac | rs778653296 |
Gnomad | rs778653296 |
Varsome | rs778653296 |
LitVar | rs778653296 |
Map | rs778653296 |
PheGenI | rs778653296 |
Biobank | rs778653296 |
1000 genomes | rs778653296 |
hgdp | rs778653296 |
ensembl | rs778653296 |
geneview | rs778653296 |
scholar | rs778653296 |
rs778653296 | |
pharmgkb | rs778653296 |
gwascentral | rs778653296 |
openSNP | rs778653296 |
23andMe | rs778653296 |
SNPshot | rs778653296 |
SNPdbe | rs778653296 |
MSV3d | rs778653296 |
GWAS Ctlg | rs778653296 |
Max Magnitude | 7.8 |
aka c.7006+1G>A
ClinVar | |
---|---|
Risk | Rs778653296(A;A) rs778653296(T;T) |
Alt | Rs778653296(A;A) rs778653296(T;T) |
Reference | Rs778653296(C;C) |
Significance | Pathogenic |
Disease | not provided |
Variation | info |
Gene | HSPG2 |
CLNDBN | not provided |
Reversed | 0 |
HGVS | NC_000001.10:g.22178283C>T |
CLNSRC | |
CLNACC | RCV000254867.1, |