rs778653296
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 7.8 | Schwartz Jampel syndrome type 1 |
| (A;C) | 3 | Carrier for a Schwartz Jampel syndrome mutation |
| (C;C) | 0 | common in clinvar |
| Reference | GRCh38.p7 38.3/149 |
| Chromosome | 1 |
| Position | 21851790 |
| Gene | HSPG2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs778653296 |
| dbSNP (classic) | rs778653296 |
| ClinGen | rs778653296 |
| ebi | rs778653296 |
| HLI | rs778653296 |
| Exac | rs778653296 |
| Gnomad | rs778653296 |
| Varsome | rs778653296 |
| LitVar | rs778653296 |
| Map | rs778653296 |
| PheGenI | rs778653296 |
| Biobank | rs778653296 |
| 1000 genomes | rs778653296 |
| hgdp | rs778653296 |
| ensembl | rs778653296 |
| geneview | rs778653296 |
| scholar | rs778653296 |
| rs778653296 | |
| pharmgkb | rs778653296 |
| gwascentral | rs778653296 |
| openSNP | rs778653296 |
| 23andMe | rs778653296 |
| SNPshot | rs778653296 |
| SNPdbe | rs778653296 |
| MSV3d | rs778653296 |
| GWAS Ctlg | rs778653296 |
| Max Magnitude | 7.8 |
aka c.7006+1G>A
| ClinVar | |
|---|---|
| Risk | Rs778653296(A;A) rs778653296(T;T) |
| Alt | Rs778653296(A;A) rs778653296(T;T) |
| Reference | Rs778653296(C;C) |
| Significance | Pathogenic |
| Disease | not provided |
| Variation | info |
| Gene | HSPG2 |
| CLNDBN | not provided |
| Reversed | 0 |
| HGVS | NC_000001.10:g.22178283C>T |
| CLNSRC | |
| CLNACC | RCV000254867.1, |
