rs794727444
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;G) | 6 | Early infantile epileptic encephalopathy and also benign infantile spasms |
| (G;G) | 0 | common in clinvar |
| Make rs794727444(A;A) |
| Reference | GRCh38.p2 38.2/146 |
| Chromosome | 2 |
| Position | 165389451 |
| Gene | SCN2A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs794727444 |
| dbSNP (classic) | rs794727444 |
| ClinGen | rs794727444 |
| ebi | rs794727444 |
| HLI | rs794727444 |
| Exac | rs794727444 |
| Gnomad | rs794727444 |
| Varsome | rs794727444 |
| LitVar | rs794727444 |
| Map | rs794727444 |
| PheGenI | rs794727444 |
| Biobank | rs794727444 |
| 1000 genomes | rs794727444 |
| hgdp | rs794727444 |
| ensembl | rs794727444 |
| geneview | rs794727444 |
| scholar | rs794727444 |
| rs794727444 | |
| pharmgkb | rs794727444 |
| gwascentral | rs794727444 |
| openSNP | rs794727444 |
| 23andMe | rs794727444 |
| SNPshot | rs794727444 |
| SNPdbe | rs794727444 |
| MSV3d | rs794727444 |
| GWAS Ctlg | rs794727444 |
| Max Magnitude | 6 |
rs794727444, also known as c.5645G>A, p.Arg1882Gln and R1882Q, is a rare variant in the SCN2A gene on chromosome 2.
The rs794727444(A) allele is reported by multiple sources in ClinVar to be associated with both benign familial neonatal-infantile seizures (BFNIS) and early infantile epileptic encephalopathy, type 11.
| ClinVar | |
|---|---|
| Risk | rs794727444(A;A) rs794727444(T;T) |
| Alt | rs794727444(A;A) rs794727444(T;T) |
| Reference | Rs794727444(G;G) |
| Significance | Pathogenic |
| Disease | Benign familial neonatal-infantile seizures Early infantile epileptic encephalopathy 11 not provided Epileptic encephalopathy |
| Variation | info |
| Gene | SCN2A |
| CLNDBN | Benign familial neonatal-infantile seizures Early infantile epileptic encephalopathy 11 not provided Epileptic encephalopathy |
| Reversed | 0 |
| HGVS | NC_000002.11:g.166245961G>A; NC_000002.11:g.166245961G>T |
| CLNSRC | |
| CLNACC | RCV000176762.1, RCV000176763.1, RCV000189181.2, RCV000417008.1, RCV000189182.3, |
