rs7993214
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs7993214(C;C) |
| Make rs7993214(C;T) |
| Make rs7993214(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 39776775 |
| Gene | COG6 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs7993214 |
| dbSNP (classic) | rs7993214 |
| ClinGen | rs7993214 |
| ebi | rs7993214 |
| HLI | rs7993214 |
| Exac | rs7993214 |
| Gnomad | rs7993214 |
| Varsome | rs7993214 |
| LitVar | rs7993214 |
| Map | rs7993214 |
| PheGenI | rs7993214 |
| Biobank | rs7993214 |
| 1000 genomes | rs7993214 |
| hgdp | rs7993214 |
| ensembl | rs7993214 |
| geneview | rs7993214 |
| scholar | rs7993214 |
| rs7993214 | |
| pharmgkb | rs7993214 |
| gwascentral | rs7993214 |
| openSNP | rs7993214 |
| 23andMe | rs7993214 |
| SNPshot | rs7993214 |
| SNPdbe | rs7993214 |
| MSV3d | rs7993214 |
| GWAS Ctlg | rs7993214 |
| GMAF | 0.2952 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 18369459
] rs7993214 was a significant SNP associated with risk for psoriasis in a large US/UK study.
| GWAS | |
|---|---|
| SNP | rs7993214 |
| PubMedID | [PMID 18369459]
|
| Condition | Psoriasis |
| Gene | COG6 |
| Risk Allele | |
| pValue | 2.00E-006 |
| OR | 1.41 |
| 95% CI | 1.22-1.61 |
[PMID 20722033] The susceptibility loci juvenile idiopathic arthritis shares with other autoimmune diseases extend to PTPN2, COG6, and ANGPT1.
