rs80338701
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;C) | 3 | Carrier of a congenital disorder of glycosylation type I mutation |
| (C;C) | 0 | common in clinvar |
| Make rs80338701(A;A) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 8811088 |
| Gene | PMM2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80338701 |
| dbSNP (classic) | rs80338701 |
| ClinGen | rs80338701 |
| ebi | rs80338701 |
| HLI | rs80338701 |
| Exac | rs80338701 |
| Gnomad | rs80338701 |
| Varsome | rs80338701 |
| LitVar | rs80338701 |
| Map | rs80338701 |
| PheGenI | rs80338701 |
| Biobank | rs80338701 |
| 1000 genomes | rs80338701 |
| hgdp | rs80338701 |
| ensembl | rs80338701 |
| geneview | rs80338701 |
| scholar | rs80338701 |
| rs80338701 | |
| pharmgkb | rs80338701 |
| gwascentral | rs80338701 |
| openSNP | rs80338701 |
| 23andMe | rs80338701 |
| SNPshot | rs80338701 |
| SNPdbe | rs80338701 |
| MSV3d | rs80338701 |
| GWAS Ctlg | rs80338701 |
| Max Magnitude | 3 |
aka c.357C>A (p.Phe119Leu or F119L)
23andMe name: i5012679
| ClinVar | |
|---|---|
| Risk | rs80338701(A;A) |
| Alt | rs80338701(A;A) |
| Reference | Rs80338701(C;C) |
| Significance | Pathogenic |
| Disease | Carbohydrate-deficient glycoprotein syndrome type I not provided Congenital disorder of glycosylation |
| Variation | info |
| Gene | PMM2 |
| CLNDBN | Carbohydrate-deficient glycoprotein syndrome type I not provided Congenital disorder of glycosylation |
| Reversed | 0 |
| HGVS | NC_000016.9:g.8904945C>A |
| CLNSRC | HGMD OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000008150.5, RCV000078589.3, RCV000386015.1, |
[PMID 9497260
] Lack of homozygotes for the most frequent disease allele in carbohydrate-deficient glycoprotein syndrome type 1A.
[PMID 9781039] Absence of homozygosity for predominant mutations in PMM2 in Danish patients with carbohydrate-deficient glycoprotein syndrome type 1.
