rs80338844
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 6.2 | Hereditary PGL/PCC Syndrome |
Make rs80338844(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 112088939 |
Gene | SDHD |
is a | snp |
is | mentioned by |
dbSNP | rs80338844 |
dbSNP (classic) | rs80338844 |
ClinGen | rs80338844 |
ebi | rs80338844 |
HLI | rs80338844 |
Exac | rs80338844 |
Gnomad | rs80338844 |
Varsome | rs80338844 |
LitVar | rs80338844 |
Map | rs80338844 |
PheGenI | rs80338844 |
Biobank | rs80338844 |
1000 genomes | rs80338844 |
hgdp | rs80338844 |
ensembl | rs80338844 |
geneview | rs80338844 |
scholar | rs80338844 |
rs80338844 | |
pharmgkb | rs80338844 |
gwascentral | rs80338844 |
openSNP | rs80338844 |
23andMe | rs80338844 |
SNPshot | rs80338844 |
SNPdbe | rs80338844 |
MSV3d | rs80338844 |
GWAS Ctlg | rs80338844 |
Max Magnitude | 6.2 |
ClinVar | |
---|---|
Risk | rs80338844(T;T) |
Alt | rs80338844(T;T) |
Reference | Rs80338844(C;C) |
Significance | Pathogenic |
Disease | Paragangliomas 1 Pheochromocytoma Hereditary Paraganglioma-Pheochromocytoma Syndromes Paragangliomas 1 with sensorineural hearing loss Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | SDHD |
CLNDBN | Paragangliomas 1 Pheochromocytoma Hereditary Paraganglioma-Pheochromocytoma Syndromes Paragangliomas 1 with sensorineural hearing loss Hereditary cancer-predisposing syndrome not provided |
Reversed | 0 |
HGVS | NC_000011.9:g.111959663C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000007303.2, RCV000007304.4, RCV000020519.1, RCV000023206.2, RCV000162448.3, RCV000216073.2, RCV000234438.2, |
[PMID 11391] The estimation of pancreatic lipase--a brief review.
[PMID 10657297] Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma.
[PMID 11343322] Novel mutations and the emergence of a common mutation in the SDHD gene causing familial paraganglioma.
[PMID 11391796] Novel mutations in the SDHD gene in pedigrees with familial carotid body paraganglioma and sensorineural hearing loss.
[PMID 11897817] Prevalence of SDHB, SDHC, and SDHD germline mutations in clinic patients with head and neck paragangliomas.
[PMID 12811540] Altitude is a phenotypic modifier in hereditary paraganglioma type 1: evidence for an oxygen-sensing defect.