rs80338909
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (A;C) | 5 | tendency for multiple cutaneous and mucosal venous malformations |
| (A;G) | 5 | tendency for multiple cutaneous and mucosal venous malformations |
| Make rs80338909(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 27212710 |
| Gene | TEK |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80338909 |
| dbSNP (classic) | rs80338909 |
| ClinGen | rs80338909 |
| ebi | rs80338909 |
| HLI | rs80338909 |
| Exac | rs80338909 |
| Gnomad | rs80338909 |
| Varsome | rs80338909 |
| LitVar | rs80338909 |
| Map | rs80338909 |
| PheGenI | rs80338909 |
| Biobank | rs80338909 |
| 1000 genomes | rs80338909 |
| hgdp | rs80338909 |
| ensembl | rs80338909 |
| geneview | rs80338909 |
| scholar | rs80338909 |
| rs80338909 | |
| pharmgkb | rs80338909 |
| gwascentral | rs80338909 |
| openSNP | rs80338909 |
| 23andMe | rs80338909 |
| SNPshot | rs80338909 |
| SNPdbe | rs80338909 |
| MSV3d | rs80338909 |
| GWAS Ctlg | rs80338909 |
| Max Magnitude | 5 |
rs80338909, also known as c.2690A>G, p.Tyr897Cys and Y897C, as well as c.2690A>C, Tyr897Ser and Y897S, represents a mutation in the TEK gene on chromosome 9.
Both the rare (G) and (C) minor alleles for this SNP are reported to cause Multiple cutaneous and mucosal venous malformations.
| ClinVar | |
|---|---|
| Risk | rs80338909(C;C) rs80338909(G;G) |
| Alt | rs80338909(C;C) rs80338909(G;G) |
| Reference | Rs80338909(A;A) |
| Significance | Pathogenic |
| Disease | Multiple Cutaneous and Mucosal Venous Malformations |
| Variation | info |
| Gene | TEK |
| CLNDBN | Multiple Cutaneous and Mucosal Venous Malformations |
| Reversed | 0 |
| HGVS | NC_000009.11:g.27212708A>C; NC_000009.11:g.27212708A>G |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000009877.2, RCV000022955.2, |
[PMID 10369874] Allelic and locus heterogeneity in inherited venous malformations.
[PMID 23566851] Association study between of Tie2/angiopoietin-2 and VEGF/KDR pathway gene polymorphisms and vascular malformations
