rs80338940
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 3 | Carrier of a recessive deafness mutation |
(G;G) | 0 | common in clinvar |
Make rs80338940(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 20192782 |
Gene | GJB2 |
is a | snp |
is | mentioned by |
dbSNP | rs80338940 |
dbSNP (classic) | rs80338940 |
ClinGen | rs80338940 |
ebi | rs80338940 |
HLI | rs80338940 |
Exac | rs80338940 |
Gnomad | rs80338940 |
Varsome | rs80338940 |
LitVar | rs80338940 |
Map | rs80338940 |
PheGenI | rs80338940 |
Biobank | rs80338940 |
1000 genomes | rs80338940 |
hgdp | rs80338940 |
ensembl | rs80338940 |
geneview | rs80338940 |
scholar | rs80338940 |
rs80338940 | |
pharmgkb | rs80338940 |
gwascentral | rs80338940 |
openSNP | rs80338940 |
23andMe | rs80338940 |
SNPshot | rs80338940 |
SNPdbe | rs80338940 |
MSV3d | rs80338940 |
GWAS Ctlg | rs80338940 |
Max Magnitude | 3 |
ClinVar | |
---|---|
Risk | rs80338940(A;A) |
Alt | rs80338940(A;A) |
Reference | Rs80338940(G;G) |
Significance | Pathogenic |
Disease | Deafness Hearing impairment Nonsyndromic hearing loss and deafness not provided |
Variation | info |
Gene | GJB2 |
CLNDBN | Deafness, autosomal recessive 1A Hearing impairment Nonsyndromic hearing loss and deafness not provided |
Reversed | 1 |
HGVS | NC_000013.10:g.20766921C>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000018557.34, RCV000146002.1, RCV000211766.1, RCV000418755.1, |
[PMID 10218527] Clinical features of the prevalent form of childhood deafness, DFNB1, due to a connexin-26 gene defect: implications for genetic counselling.
[PMID 11935342] Genetics of congenital deafness in the Palestinian population: multiple connexin 26 alleles with shared origins in the Middle East.
[PMID 14985372] A genotype-phenotype correlation for GJB2 (connexin 26) deafness.
[PMID 16650079] High prevalence of the IVS 1 + 1 G to A/GJB2 mutation among Czech hearing impaired patients with monoallelic mutation in the coding region of GJB2.