rs80356491
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;-) | 5 | glycogen storage disease type 1b |
| (-;CT) | 3 | carrier for glycogen storage disease type 1b allele |
| (CT;CT) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 119025271 |
| Gene | SLC37A4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80356491 |
| dbSNP (classic) | rs80356491 |
| ClinGen | rs80356491 |
| ebi | rs80356491 |
| HLI | rs80356491 |
| Exac | rs80356491 |
| Gnomad | rs80356491 |
| Varsome | rs80356491 |
| LitVar | rs80356491 |
| Map | rs80356491 |
| PheGenI | rs80356491 |
| Biobank | rs80356491 |
| 1000 genomes | rs80356491 |
| hgdp | rs80356491 |
| ensembl | rs80356491 |
| geneview | rs80356491 |
| scholar | rs80356491 |
| rs80356491 | |
| pharmgkb | rs80356491 |
| gwascentral | rs80356491 |
| openSNP | rs80356491 |
| 23andMe | rs80356491 |
| SNPshot | rs80356491 |
| SNPdbe | rs80356491 |
| MSV3d | rs80356491 |
| GWAS Ctlg | rs80356491 |
| Max Magnitude | 5 |
rs80356491, also known as 1042_1043delCT or 1211-1212delCT, is a SNP in the solute carrier family 37 (glucose-6-phosphate transporter), member 4 SLC37A4 gene.
This mutation is reported by 23andMe as accounting for approximately 30% of glycogen storage disease type 1b-causing mutations in people of European ancestry; 23andMe uses the term i5012880 for this SNP.
| ClinVar | |
|---|---|
| Risk | Rs80356491(-;-) |
| Alt | Rs80356491(-;-) |
| Reference | Rs80356491(CT;CT) |
| Significance | Pathogenic |
| Disease | Glucose-6-phosphate transport defect Phosphate transport defect |
| Variation | info |
| Gene | SLC37A4 |
| CLNDBN | Glucose-6-phosphate transport defect Phosphate transport defect |
| Reversed | 1 |
| HGVS | NC_000011.9:g.118895981_118895982delAG |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000007336.5, RCV000007337.3, |
[PMID 9758626
] A gene on chromosome 11q23 coding for a putative glucose- 6-phosphate translocase is mutated in glycogen-storage disease types Ib and Ic.
[PMID 10323254] Molecular diagnosis of type 1c glycogen storage disease.
