rs80356491
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 5 | glycogen storage disease type 1b |
(-;CT) | 3 | carrier for glycogen storage disease type 1b allele |
(CT;CT) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 119025271 |
Gene | SLC37A4 |
is a | snp |
is | mentioned by |
dbSNP | rs80356491 |
dbSNP (classic) | rs80356491 |
ClinGen | rs80356491 |
ebi | rs80356491 |
HLI | rs80356491 |
Exac | rs80356491 |
Gnomad | rs80356491 |
Varsome | rs80356491 |
LitVar | rs80356491 |
Map | rs80356491 |
PheGenI | rs80356491 |
Biobank | rs80356491 |
1000 genomes | rs80356491 |
hgdp | rs80356491 |
ensembl | rs80356491 |
geneview | rs80356491 |
scholar | rs80356491 |
rs80356491 | |
pharmgkb | rs80356491 |
gwascentral | rs80356491 |
openSNP | rs80356491 |
23andMe | rs80356491 |
SNPshot | rs80356491 |
SNPdbe | rs80356491 |
MSV3d | rs80356491 |
GWAS Ctlg | rs80356491 |
Max Magnitude | 5 |
rs80356491, also known as 1042_1043delCT or 1211-1212delCT, is a SNP in the solute carrier family 37 (glucose-6-phosphate transporter), member 4 SLC37A4 gene.
This mutation is reported by 23andMe as accounting for approximately 30% of glycogen storage disease type 1b-causing mutations in people of European ancestry; 23andMe uses the term i5012880 for this SNP.
ClinVar | |
---|---|
Risk | Rs80356491(-;-) |
Alt | Rs80356491(-;-) |
Reference | Rs80356491(CT;CT) |
Significance | Pathogenic |
Disease | Glucose-6-phosphate transport defect Phosphate transport defect |
Variation | info |
Gene | SLC37A4 |
CLNDBN | Glucose-6-phosphate transport defect Phosphate transport defect |
Reversed | 1 |
HGVS | NC_000011.9:g.118895981_118895982delAG |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000007336.5, RCV000007337.3, |
[PMID 9758626] A gene on chromosome 11q23 coding for a putative glucose- 6-phosphate translocase is mutated in glycogen-storage disease types Ib and Ic.
[PMID 10323254] Molecular diagnosis of type 1c glycogen storage disease.