rs80356898
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | Normal |
| (C;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
| Make rs80356898(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 43093844 |
| Gene | BRCA1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80356898 |
| dbSNP (classic) | rs80356898 |
| ClinGen | rs80356898 |
| ebi | rs80356898 |
| HLI | rs80356898 |
| Exac | rs80356898 |
| Gnomad | rs80356898 |
| Varsome | rs80356898 |
| LitVar | rs80356898 |
| Map | rs80356898 |
| PheGenI | rs80356898 |
| Biobank | rs80356898 |
| 1000 genomes | rs80356898 |
| hgdp | rs80356898 |
| ensembl | rs80356898 |
| geneview | rs80356898 |
| scholar | rs80356898 |
| rs80356898 | |
| pharmgkb | rs80356898 |
| gwascentral | rs80356898 |
| openSNP | rs80356898 |
| 23andMe | rs80356898 |
| SNPshot | rs80356898 |
| SNPdbe | rs80356898 |
| MSV3d | rs80356898 |
| GWAS Ctlg | rs80356898 |
| Max Magnitude | 6 |
rs80356898, also known as Q563X, c.1687C>T and p.Gln563Ter, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
23andMe name: i6051897
| ClinVar | |
|---|---|
| Risk | rs80356898(T;T) |
| Alt | rs80356898(T;T) |
| Reference | Rs80356898(C;C) |
| Significance | Pathogenic |
| Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided Ovarian cancer Breast carcinoma Ovarian neoplasm |
| Variation | info |
| Gene | BRCA1 |
| CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided Ovarian cancer Breast carcinoma Ovarian neoplasm |
| Reversed | 1 |
| HGVS | NC_000017.10:g.41245861G>A |
| CLNSRC | Ambry Genetics ClinVar |
| CLNACC | RCV000031007.10, RCV000047559.6, RCV000131897.4, RCV000159956.3, RCV000238721.1, RCV000415155.1, |
