rs80357520
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;TA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(TA;TA) | 0 | Normal |
Make rs80357520(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091771 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357520 |
dbSNP (classic) | rs80357520 |
ClinGen | rs80357520 |
ebi | rs80357520 |
HLI | rs80357520 |
Exac | rs80357520 |
Gnomad | rs80357520 |
Varsome | rs80357520 |
LitVar | rs80357520 |
Map | rs80357520 |
PheGenI | rs80357520 |
Biobank | rs80357520 |
1000 genomes | rs80357520 |
hgdp | rs80357520 |
ensembl | rs80357520 |
geneview | rs80357520 |
scholar | rs80357520 |
rs80357520 | |
pharmgkb | rs80357520 |
gwascentral | rs80357520 |
openSNP | rs80357520 |
23andMe | rs80357520 |
SNPshot | rs80357520 |
SNPdbe | rs80357520 |
MSV3d | rs80357520 |
GWAS Ctlg | rs80357520 |
Max Magnitude | 6 |
rs80357520, also known as 3878delTA, c.3759_3760delTA and p.Ser1253_Lys1254SerGlufs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80357520(-;-) |
Alt | rs80357520(-;-) |
Reference | Rs80357520(TA;TA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Familial cancer of breast Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Familial cancer of breast Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41243788_41243789delTA |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000031125.6, RCV000048317.3, RCV000223389.1, RCV000254638.1, |