rs80357713
From SNPedia
Merged into | rs80357783 |
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 0 | common/normal |
(-;AG) | 3 | rare BRCA1 variant, of unclear pathogenicity |
Make rs80357713(AG;AG) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43124030 |
Gene | BRCA1, NBR2 |
is a | snp |
is | mentioned by |
dbSNP | rs80357713 |
dbSNP (classic) | rs80357713 |
ClinGen | rs80357713 |
ebi | rs80357713 |
HLI | rs80357713 |
Exac | rs80357713 |
Gnomad | rs80357713 |
Varsome | rs80357713 |
LitVar | rs80357713 |
Map | rs80357713 |
PheGenI | rs80357713 |
Biobank | rs80357713 |
1000 genomes | rs80357713 |
hgdp | rs80357713 |
ensembl | rs80357713 |
geneview | rs80357713 |
scholar | rs80357713 |
rs80357713 | |
pharmgkb | rs80357713 |
gwascentral | rs80357713 |
openSNP | rs80357713 |
23andMe | rs80357713 |
SNPshot | rs80357713 |
SNPdbe | rs80357713 |
MSV3d | rs80357713 |
GWAS Ctlg | rs80357713 |
Status | Merged into rs80357783 |
Max Magnitude | 3 |
rs80357713, also known as c.66_67insAG, represents a 2 nucleotide insertion variant in between GRCh37 position 17:41276047-8.
Technically, at the sequence level this changes GGACACTCTAA to GGACACCctTAA, where the lower case "ct" indicates the variant insertion.
The pathogenicity of this rare mutation is not reported in ClinVar and dbSNP.
In the BIC database, rs80357713 appears to be incorrectly reported as being the "185delAG" mutation, which is actually correctly represented as either rs386833395 or rs796856605.
ClinVar | |
---|---|
Risk | rs80357713(AG;AG) |
Alt | rs80357713(AG;AG) |
Reference | rs80357713(AG;AG) |
Significance | Other |
Disease | Breast-ovarian cancer Pancreatic cancer 4 BRCA1 and BRCA2 Hereditary Breast and Ovarian Cancer Familial cancer of breast Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | NBR2 BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Pancreatic cancer 4 BRCA1 and BRCA2 Hereditary Breast and Ovarian Cancer Familial cancer of breast Hereditary cancer-predisposing syndrome |
Reversed | 1 |
HGVS | NC_000017.11:g.43124030_43124031delCT |
CLNSRC | Breast Cancer Information Core (BRCA1) OMIM Allelic Variant |
CLNACC | RCV000019230.10, RCV000019231.1, RCV000034761.3, RCV000056295.6, RCV000131394.2, |