rs80357842
From SNPedia
					| Orientation | minus | 
| Stabilized | minus | 
| Geno | Mag | Summary | 
|---|---|---|
| (-;AGTG) | 6 | BRCA1 variant considered pathogenic for breast cancer | 
| (-;TGAG) | 6 | BRCA1 variant considered pathogenic for breast cancer | 
| (AGTG;AGTG) | 0 | common/normal | 
| (TGAG;TGAG) | 0 | common in clinvar | 
| Make rs80357842(-;-) | 
| Reference | GRCh38 38.1/142 | 
| Chromosome | 17 | 
| Position | 43091672 | 
| Gene | BRCA1 | 
| is a | snp | 
| is | mentioned by | 
| dbSNP | rs80357842 | 
| dbSNP (classic) | rs80357842 | 
| ClinGen | rs80357842 | 
| ebi | rs80357842 | 
| HLI | rs80357842 | 
| Exac | rs80357842 | 
| Gnomad | rs80357842 | 
| Varsome | rs80357842 | 
| LitVar | rs80357842 | 
| Map | rs80357842 | 
| PheGenI | rs80357842 | 
| Biobank | rs80357842 | 
| 1000 genomes | rs80357842 | 
| hgdp | rs80357842 | 
| ensembl | rs80357842 | 
| geneview | rs80357842 | 
| scholar | rs80357842 | 
| rs80357842 | |
| pharmgkb | rs80357842 | 
| gwascentral | rs80357842 | 
| openSNP | rs80357842 | 
| 23andMe | rs80357842 | 
| SNPshot | rs80357842 | 
| SNPdbe | rs80357842 | 
| MSV3d | rs80357842 | 
| GWAS Ctlg | rs80357842 | 
| Merged from | Rs80357889 | 
| Max Magnitude | 6 | 
rs80357842, also known as 3975del4, c.3856_3859delAGTG and p.Ser1286_Glu1287?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | Rs80357842(TGAG;TGAG) rs80357842(-;-) | 
| Alt | Rs80357842(TGAG;TGAG) rs80357842(-;-) | 
| Reference | Rs80357842(AGTG;AGTG) | 
| Significance | Pathogenic | 
| Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome | 
| Variation | info | 
| Gene | BRCA1 | 
| CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome | 
| Reversed | 1 | 
| HGVS | NC_000017.10:g.41243687_41243690delCTCA | 
| CLNSRC | Breast Cancer Information Core (BRCA1) | 
| CLNACC | RCV000031134.8, RCV000048359.6, | 
