rs80357971
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(-;AA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(AA;AA) | 0 | Normal |
Make rs80357971(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43092849 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357971 |
dbSNP (classic) | rs80357971 |
ClinGen | rs80357971 |
ebi | rs80357971 |
HLI | rs80357971 |
Exac | rs80357971 |
Gnomad | rs80357971 |
Varsome | rs80357971 |
LitVar | rs80357971 |
Map | rs80357971 |
PheGenI | rs80357971 |
Biobank | rs80357971 |
1000 genomes | rs80357971 |
hgdp | rs80357971 |
ensembl | rs80357971 |
geneview | rs80357971 |
scholar | rs80357971 |
rs80357971 | |
pharmgkb | rs80357971 |
gwascentral | rs80357971 |
openSNP | rs80357971 |
23andMe | rs80357971 |
SNPshot | rs80357971 |
SNPdbe | rs80357971 |
MSV3d | rs80357971 |
GWAS Ctlg | rs80357971 |
Max Magnitude | 6 |
rs80357971, also known as 2800delAA, c.2681_2682delAA and p.Lys894Thrfs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
This BRCA1 mutation is generally considered to be a founder mutation from Scotland and Northern Ireland.[PMID 12698193]
23andMe name: i4000456
ClinVar | |
---|---|
Risk | rs80357971(-;-) |
Alt | rs80357971(-;-) |
Reference | Rs80357971(AA;AA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome not provided Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome not provided Hereditary cancer-predisposing syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.41244866_41244867delTT |
CLNSRC | Breast Cancer Information Core (BRCA1) OMIM Allelic Variant |
CLNACC | RCV000019236.11, RCV000047927.6, RCV000074575.7, RCV000131876.3, |