rs80357999
From SNPedia
| Merged into | rs80357706 |
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;TG) | 6 | BRCA1 variant considered pathogenic for breast cancer |
| (TG;TG) | 0 | common in clinvar |
| Make rs80357999(-;-) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 17 |
| Position | 43093129 |
| Gene | BRCA1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80357999 |
| dbSNP (classic) | rs80357999 |
| ClinGen | rs80357999 |
| ebi | rs80357999 |
| HLI | rs80357999 |
| Exac | rs80357999 |
| Gnomad | rs80357999 |
| Varsome | rs80357999 |
| LitVar | rs80357999 |
| Map | rs80357999 |
| PheGenI | rs80357999 |
| Biobank | rs80357999 |
| 1000 genomes | rs80357999 |
| hgdp | rs80357999 |
| ensembl | rs80357999 |
| geneview | rs80357999 |
| scholar | rs80357999 |
| rs80357999 | |
| pharmgkb | rs80357999 |
| gwascentral | rs80357999 |
| openSNP | rs80357999 |
| 23andMe | rs80357999 |
| SNPshot | rs80357999 |
| SNPdbe | rs80357999 |
| MSV3d | rs80357999 |
| GWAS Ctlg | rs80357999 |
| Status | Merged into rs80357706 |
| Max Magnitude | 6 |
rs80357999, also known as 2520delTG, c.2401_2402delTG and p.Cys801=fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | |
| Alt | |
| Reference | Rs80357999(TG;TG) |
| Significance | Pathogenic |
| Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome |
| Variation | info |
| Gene | BRCA1 |
| CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 Hereditary cancer-predisposing syndrome |
| Reversed | 1 |
| HGVS | NC_000017.10:g.41245142_41245143delCA |
| CLNSRC | Breast Cancer Information Core (BRCA1) |
| CLNACC | RCV000047826.3, RCV000111844.2, RCV000162857.1, |
