rs80358030
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;G) | 6 | BRCA1 variant considered pathogenic for breast cancer |
| (G;G) | 0 | common in clinvar |
| (G;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
| Make rs80358030(A;A) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 43099774 |
| Gene | BRCA1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80358030 |
| dbSNP (classic) | rs80358030 |
| ClinGen | rs80358030 |
| ebi | rs80358030 |
| HLI | rs80358030 |
| Exac | rs80358030 |
| Gnomad | rs80358030 |
| Varsome | rs80358030 |
| LitVar | rs80358030 |
| Map | rs80358030 |
| PheGenI | rs80358030 |
| Biobank | rs80358030 |
| 1000 genomes | rs80358030 |
| hgdp | rs80358030 |
| ensembl | rs80358030 |
| geneview | rs80358030 |
| scholar | rs80358030 |
| rs80358030 | |
| pharmgkb | rs80358030 |
| gwascentral | rs80358030 |
| openSNP | rs80358030 |
| 23andMe | rs80358030 |
| SNPshot | rs80358030 |
| SNPdbe | rs80358030 |
| MSV3d | rs80358030 |
| GWAS Ctlg | rs80358030 |
| Max Magnitude | 6 |
rs80358030, known as c.547+1G>A and also c.547+1G>T, represents a rare variant in the BRCA1 gene.
Both minor alleles are considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs80358030(A;A) rs80358030(T;T) |
| Alt | rs80358030(A;A) rs80358030(T;T) |
| Reference | Rs80358030(G;G) |
| Significance | Other |
| Disease | Familial cancer of breast Breast-ovarian cancer not provided Hereditary cancer-predisposing syndrome |
| Variation | info |
| Gene | BRCA1 |
| CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 not provided Hereditary cancer-predisposing syndrome |
| Reversed | 1 |
| HGVS | NC_000017.10:g.41251791C>A; NC_000017.10:g.41251791C>T |
| CLNSRC | Breast Cancer Information Core (BRCA1) |
| CLNACC | RCV000049008.4, RCV000112730.1, RCV000212159.1, RCV000216456.1, RCV000112729.1, |
