rs80358695
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| (G;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
| Make rs80358695(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 32339003 |
| Gene | BRCA2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80358695 |
| dbSNP (classic) | rs80358695 |
| ClinGen | rs80358695 |
| ebi | rs80358695 |
| HLI | rs80358695 |
| Exac | rs80358695 |
| Gnomad | rs80358695 |
| Varsome | rs80358695 |
| LitVar | rs80358695 |
| Map | rs80358695 |
| PheGenI | rs80358695 |
| Biobank | rs80358695 |
| 1000 genomes | rs80358695 |
| hgdp | rs80358695 |
| ensembl | rs80358695 |
| geneview | rs80358695 |
| scholar | rs80358695 |
| rs80358695 | |
| pharmgkb | rs80358695 |
| gwascentral | rs80358695 |
| openSNP | rs80358695 |
| 23andMe | rs80358695 |
| SNPshot | rs80358695 |
| SNPdbe | rs80358695 |
| MSV3d | rs80358695 |
| GWAS Ctlg | rs80358695 |
| Max Magnitude | 6 |
rs80358695, also known as E1550X, c.4648G>T and p.Glu1550Ter, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
The minor allele for this variant has also been found in a BRCA2 compound heterozygote, associated with Fanconi anemia complementation group D1.
| ClinVar | |
|---|---|
| Risk | rs80358695(C;C) rs80358695(T;T) |
| Alt | rs80358695(C;C) rs80358695(T;T) |
| Reference | Rs80358695(G;G) |
| Significance | Pathogenic |
| Disease | Breast-ovarian cancer Fanconi anemia Hereditary breast and ovarian cancer syndrome |
| Variation | info |
| Gene | BRCA2 |
| CLNDBN | Breast-ovarian cancer, familial 2 Fanconi anemia, complementation group D1 Hereditary breast and ovarian cancer syndrome |
| Reversed | 0 |
| HGVS | NC_000013.10:g.32913140G>C; NC_000013.10:g.32913140G>T |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000210981.1, RCV000009935.3, RCV000044460.3, RCV000113326.3, |
