rs80358815
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;C) | 6 | Likely miscall in Ancestry data; otherwise, BRCA2 variant considered pathogenic for breast cancer |
| (C;C) | 0 | common in clinvar |
| (C;G) | 6 | BRCA2 variant considered pathogenic for breast cancer |
| Make rs80358815(A;A) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 32340219 |
| Gene | BRCA2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80358815 |
| dbSNP (classic) | rs80358815 |
| ClinGen | rs80358815 |
| ebi | rs80358815 |
| HLI | rs80358815 |
| Exac | rs80358815 |
| Gnomad | rs80358815 |
| Varsome | rs80358815 |
| LitVar | rs80358815 |
| Map | rs80358815 |
| PheGenI | rs80358815 |
| Biobank | rs80358815 |
| 1000 genomes | rs80358815 |
| hgdp | rs80358815 |
| ensembl | rs80358815 |
| geneview | rs80358815 |
| scholar | rs80358815 |
| rs80358815 | |
| pharmgkb | rs80358815 |
| gwascentral | rs80358815 |
| openSNP | rs80358815 |
| 23andMe | rs80358815 |
| SNPshot | rs80358815 |
| SNPdbe | rs80358815 |
| MSV3d | rs80358815 |
| GWAS Ctlg | rs80358815 |
| Max Magnitude | 6 |
rs80358815, also known as S1955X, c.5864C>A and p.Ser1955Ter, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs80358815(A;A) rs80358815(G;G) rs80358815(T;T) |
| Alt | rs80358815(A;A) rs80358815(G;G) rs80358815(T;T) |
| Reference | Rs80358815(C;C) |
| Significance | Pathogenic |
| Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided Familial cancer of breast |
| Variation | info |
| Gene | BRCA2 |
| CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome not provided Familial cancer of breast |
| Reversed | 0 |
| HGVS | NC_000013.10:g.32914356C>A; NC_000013.10:g.32914356C>G; NC_000013.10:g.32914356C>T |
| CLNSRC | ClinVar Ambry Genetics |
| CLNACC | RCV000044777.4, RCV000077364.7, RCV000162927.2, RCV000221022.2, RCV000044778.2, RCV000131666.2, RCV000241225.1, RCV000476307.1, |
