rs80358979
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;T) | 5 | BRCA2 variant considered pathogenic for breast cancer |
| (T;T) | 0 | common in clinvar |
| Make rs80358979(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 32356521 |
| Gene | BRCA2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80358979 |
| dbSNP (classic) | rs80358979 |
| ClinGen | rs80358979 |
| ebi | rs80358979 |
| HLI | rs80358979 |
| Exac | rs80358979 |
| Gnomad | rs80358979 |
| Varsome | rs80358979 |
| LitVar | rs80358979 |
| Map | rs80358979 |
| PheGenI | rs80358979 |
| Biobank | rs80358979 |
| 1000 genomes | rs80358979 |
| hgdp | rs80358979 |
| ensembl | rs80358979 |
| geneview | rs80358979 |
| scholar | rs80358979 |
| rs80358979 | |
| pharmgkb | rs80358979 |
| gwascentral | rs80358979 |
| openSNP | rs80358979 |
| 23andMe | rs80358979 |
| SNPshot | rs80358979 |
| SNPdbe | rs80358979 |
| MSV3d | rs80358979 |
| GWAS Ctlg | rs80358979 |
| Max Magnitude | 5 |
aka c.7529T>C (p.Leu2510Pro)
Classified as a BRCA2 gene pathogenic mutation for breast cancer based on likelihood cited in ClinVar and in [PMID 29394989
]
| ClinVar | |
|---|---|
| Risk | rs80358979(C;C) |
| Alt | rs80358979(C;C) |
| Reference | Rs80358979(T;T) |
| Significance | Pathogenic |
| Disease | Fanconi anemia Familial cancer of breast Breast-ovarian cancer not provided |
| Variation | info |
| Gene | BRCA2 |
| CLNDBN | Fanconi anemia, complementation group D1 Familial cancer of breast Breast-ovarian cancer, familial 2 not provided |
| Reversed | 0 |
| HGVS | NC_000013.10:g.32930658T>C |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000009936.6, RCV000045238.2, RCV000113772.1, RCV000478444.1, |
