rs80359484
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (-;ATGT) | 6 | BRCA2 variant considered pathogenic for breast cancer |
| (-;TGTA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
| (ATGT;ATGT) | 0 | common in clinvar |
| (TATG;TATG) | 0 | common in clinvar |
| Make rs80359484(-;-) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 13 |
| Position | 32339484 |
| Gene | BRCA2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80359484 |
| dbSNP (classic) | rs80359484 |
| ClinGen | rs80359484 |
| ebi | rs80359484 |
| HLI | rs80359484 |
| Exac | rs80359484 |
| Gnomad | rs80359484 |
| Varsome | rs80359484 |
| LitVar | rs80359484 |
| Map | rs80359484 |
| PheGenI | rs80359484 |
| Biobank | rs80359484 |
| 1000 genomes | rs80359484 |
| hgdp | rs80359484 |
| ensembl | rs80359484 |
| geneview | rs80359484 |
| scholar | rs80359484 |
| rs80359484 | |
| pharmgkb | rs80359484 |
| gwascentral | rs80359484 |
| openSNP | rs80359484 |
| 23andMe | rs80359484 |
| SNPshot | rs80359484 |
| SNPdbe | rs80359484 |
| MSV3d | rs80359484 |
| GWAS Ctlg | rs80359484 |
| Merged from | Rs760558178, Rs80359485 |
| Max Magnitude | 6 |
rs80359484, also known as c.5130_5133delTGTA, 5357del4, c.5129_5132delATGT and p.Tyr1710_Val1711?fs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs80359484(-;-) Rs80359484(TATG;TATG) rs80359484(TGTA;TGTA) |
| Alt | rs80359484(-;-) Rs80359484(TATG;TATG) rs80359484(TGTA;TGTA) |
| Reference | Rs80359484(ATGT;ATGT) |
| Significance | Pathogenic |
| Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome Breast-ovarian cancer not provided |
| Variation | info |
| Gene | BRCA2 |
| CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome Breast-ovarian cancer, familial 1 not provided |
| Reversed | 0 |
| HGVS | NC_000013.10:g.32913622_32913625delTGTA |
| CLNSRC | Breast Cancer Information Core (BRCA2) |
| CLNACC | RCV000044563.3, RCV000077345.7, RCV000131075.3, RCV000210164.1, RCV000215028.2, |
