rs80359872
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
| (CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA;CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA) | 0 | Normal |
| Make rs80359872(-;-) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 43094516 |
| Gene | BRCA1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80359872 |
| dbSNP (classic) | rs80359872 |
| ClinGen | rs80359872 |
| ebi | rs80359872 |
| HLI | rs80359872 |
| Exac | rs80359872 |
| Gnomad | rs80359872 |
| Varsome | rs80359872 |
| LitVar | rs80359872 |
| Map | rs80359872 |
| PheGenI | rs80359872 |
| Biobank | rs80359872 |
| 1000 genomes | rs80359872 |
| hgdp | rs80359872 |
| ensembl | rs80359872 |
| geneview | rs80359872 |
| scholar | rs80359872 |
| rs80359872 | |
| pharmgkb | rs80359872 |
| gwascentral | rs80359872 |
| openSNP | rs80359872 |
| 23andMe | rs80359872 |
| SNPshot | rs80359872 |
| SNPdbe | rs80359872 |
| MSV3d | rs80359872 |
| GWAS Ctlg | rs80359872 |
| Max Magnitude | 6 |
rs80359872, also known as 1071del64, c.952_1015del and p.His318_Lys339?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs80359872(-;-) |
| Alt | rs80359872(-;-) |
| Reference | Rs80359872(CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA;CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA) |
| Significance | Pathogenic |
| Disease | Breast-ovarian cancer Familial cancer of breast |
| Variation | info |
| Gene | BRCA1 |
| CLNDBN | Breast-ovarian cancer, familial 1 Familial cancer of breast |
| Reversed | 1 |
| HGVS | NC_000017.10:g.41246533_41246596del64 |
| CLNSRC | Breast Cancer Information Core (BRCA1) |
| CLNACC | RCV000031291.5, RCV000049201.2, |
