rs869025321
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| (G;T) | 7.5 | Lamb-shaffer syndrome |
| Make rs869025321(T;T) |
| Reference | GRCh38.p2 38.2/147 |
| Chromosome | 12 |
| Position | 23604491 |
| Gene | SOX5 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs869025321 |
| dbSNP (classic) | rs869025321 |
| ClinGen | rs869025321 |
| ebi | rs869025321 |
| HLI | rs869025321 |
| Exac | rs869025321 |
| Gnomad | rs869025321 |
| Varsome | rs869025321 |
| LitVar | rs869025321 |
| Map | rs869025321 |
| PheGenI | rs869025321 |
| Biobank | rs869025321 |
| 1000 genomes | rs869025321 |
| hgdp | rs869025321 |
| ensembl | rs869025321 |
| geneview | rs869025321 |
| scholar | rs869025321 |
| rs869025321 | |
| pharmgkb | rs869025321 |
| gwascentral | rs869025321 |
| openSNP | rs869025321 |
| 23andMe | rs869025321 |
| SNPshot | rs869025321 |
| SNPdbe | rs869025321 |
| MSV3d | rs869025321 |
| GWAS Ctlg | rs869025321 |
| Max Magnitude | 7.5 |
rs869025321, also known as c.1021G>T, p.Gly341Ter and G341X, represents a very rare mutation in the SOX5 gene on chromosome 12.
Inherited as an autosomal dominant mutation, rs869025321(T) is reported to lead to Lamb-shaffer syndrome, a disorder characterized by global developmental delay, intellectual disability, language and motor impairment, and distinct facial features.[PMID 26111154]
| ClinVar | |
|---|---|
| Risk | rs869025321(T;T) |
| Alt | rs869025321(T;T) |
| Reference | Rs869025321(G;G) |
| Significance | Pathogenic |
| Disease | Lamb-shaffer syndrome |
| Variation | info |
| Gene | SOX5 |
| CLNDBN | Lamb-shaffer syndrome |
| Reversed | 1 |
| HGVS | NC_000012.11:g.23757425C>A |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000207472.1, |
