rs879293
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs879293(A;A) |
| Make rs879293(A;G) |
| Make rs879293(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 8 |
| Position | 42197628 |
| Gene | PLAT |
| is a | snp |
| is | mentioned by |
| dbSNP | rs879293 |
| dbSNP (classic) | rs879293 |
| ClinGen | rs879293 |
| ebi | rs879293 |
| HLI | rs879293 |
| Exac | rs879293 |
| Gnomad | rs879293 |
| Varsome | rs879293 |
| LitVar | rs879293 |
| Map | rs879293 |
| PheGenI | rs879293 |
| Biobank | rs879293 |
| 1000 genomes | rs879293 |
| hgdp | rs879293 |
| ensembl | rs879293 |
| geneview | rs879293 |
| scholar | rs879293 |
| rs879293 | |
| pharmgkb | rs879293 |
| gwascentral | rs879293 |
| openSNP | rs879293 |
| 23andMe | rs879293 |
| SNPshot | rs879293 |
| SNPdbe | rs879293 |
| MSV3d | rs879293 |
| GWAS Ctlg | rs879293 |
| GMAF | 0.3535 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
A study of maternal and fetal DNA from 370 US Caucasian birth-events (172 cases and 198 controls) concluded that the single strongest effect observed in maternal DNA was for SNP rs879293, with a significant allelic (p = 2.30x10e-3) and genotypic association (p = 2.0x10e-6) with spontaneous preterm birth (PTB). The odds ratio for this SNP was 2.80 (CI:1.77-4.44) under a recessive model. [PMID 18818748
]
[PMID 18787196] Segment-specific genetic effects on carotid intima-media thickness: the Northern Manhattan study.
