rs944289
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | |
(C;T) | 2.1 | 1.3x increased thyroid cancer risk |
(T;T) | 2.2 | 1.69x increased thyroid cancer risk |
Reference | GRCh38 38.1/141 |
Chromosome | 14 |
Position | 36180040 |
is a | snp |
is | mentioned by |
dbSNP | rs944289 |
dbSNP (classic) | rs944289 |
ClinGen | rs944289 |
ebi | rs944289 |
HLI | rs944289 |
Exac | rs944289 |
Gnomad | rs944289 |
Varsome | rs944289 |
LitVar | rs944289 |
Map | rs944289 |
PheGenI | rs944289 |
Biobank | rs944289 |
1000 genomes | rs944289 |
hgdp | rs944289 |
ensembl | rs944289 |
geneview | rs944289 |
scholar | rs944289 |
rs944289 | |
pharmgkb | rs944289 |
gwascentral | rs944289 |
openSNP | rs944289 |
23andMe | rs944289 |
SNPshot | rs944289 |
SNPdbe | rs944289 |
MSV3d | rs944289 |
GWAS Ctlg | rs944289 |
GMAF | 0.4288 |
Max Magnitude | 2.2 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
[PMID 19198613] Each A at rs965513 increased the odds of thyroid cancer by 1.75 times. Each T at rs944289 increased the odds of thyroid cancer by 1.37 times.
A genoset, Gs137, has also been created in SNPedia to represent the increased risk reported for carriers of both variants.
See also: 23andMe blog
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[PMID 21730105] The FOXE1 and NKX2-1 loci are associated with susceptibility to papillary thyroid carcinoma in the Japanese population
[PMID 22282540] Thyroid cancer susceptibility polymorphisms: confirmation of loci on chromosomes 9q22 and 14q13, validation of a recessive 8q24 locus and failure to replicate a locus on 5q24
[PMID 22586128] The polymorphism rs944289 predisposes to papillary thyroid carcinoma through a large intergenic noncoding RNA gene of tumor suppressor type
[PMID 20628519] Genetic Predisposition to Familial Nonmedullary Thyroid Cancer: An Update of Molecular Findings and State-of-the-Art Studies.
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[PMID 23847140] Confirmation of papillary thyroid cancer susceptibility loci identified by genome-wide association studies of chromosomes 14q13, 9q22, 2q35 and 8p12 in a Chinese population
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[PMID 28660995] Age at diagnosis and gender modify the risk of 9q22 and 14q13 polymorphisms for papillary thyroid carcinoma.
[PMID 31681970] Clinical implications of GWAS variants associated with differentiated thyroid cancer.
[PMID 32104174] Association of rs944289, rs965513, and rs1443434 in TITF1/TITF2 with Risks of Papillary Thyroid Carcinoma and with Nodular Goiter in Northern Chinese Han Populations.