Difference between revisions of "Rs16430"
SNPediaBot (talk | contribs) m (added 5 PMIDs found via PubmedBCP) |
OrientalBot (talk | contribs) (Set on chip ancestryv2) |
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| Line 12: | Line 12: | ||
|GenomeBuild=37.3 | |GenomeBuild=37.3 | ||
|dbSNPBuild=137 | |dbSNPBuild=137 | ||
| − | }}{{PMID Auto | + | |Status=Deleted |
| + | |StabilizedOrientation=minus | ||
| + | }} | ||
| + | Note: as of Nov. 2013, this SNP is under review at dbSNP. | ||
| + | |||
| + | {{PMID Auto | ||
|PMID=23404871 | |PMID=23404871 | ||
|Title=Thymidylate synthase polymorphisms and risks of human orofacial clefts | |Title=Thymidylate synthase polymorphisms and risks of human orofacial clefts | ||
| Line 18: | Line 23: | ||
{{PMID Auto | {{PMID Auto | ||
|PMID=24166930 | |PMID=24166930 | ||
| − | |Title=Genetic variant rs16430 | + | |Title=Genetic variant rs16430 6bp > 0bp at the microRNA-binding site in TYMS and risk of sporadic breast cancer risk in non-hispanic white women aged ≤55 years |
| + | |OA=1 | ||
}}{{PMID Auto | }}{{PMID Auto | ||
|PMID=17659576 | |PMID=17659576 | ||
|Title=Genetic polymorphisms in the methylenetetrahydrofolate reductase and thymidylate synthase genes and risk of hepatocellular carcinoma. | |Title=Genetic polymorphisms in the methylenetetrahydrofolate reductase and thymidylate synthase genes and risk of hepatocellular carcinoma. | ||
| + | |OA=1 | ||
}} | }} | ||
| Line 27: | Line 34: | ||
|PMID=18669903 | |PMID=18669903 | ||
|Title=Green tea intake, MTHFR/TYMS genotype and breast cancer risk: the Singapore Chinese Health Study. | |Title=Green tea intake, MTHFR/TYMS genotype and breast cancer risk: the Singapore Chinese Health Study. | ||
| + | |OA=1 | ||
}} | }} | ||
| Line 32: | Line 40: | ||
|PMID=19379518 | |PMID=19379518 | ||
|Title=Development of a fingerprinting panel using medically relevant polymorphisms. | |Title=Development of a fingerprinting panel using medically relevant polymorphisms. | ||
| + | |OA=1 | ||
}} | }} | ||
| Line 37: | Line 46: | ||
|PMID=20565774 | |PMID=20565774 | ||
|Title=Population based allele frequencies of disease associated polymorphisms in the Personalized Medicine Research Project. | |Title=Population based allele frequencies of disease associated polymorphisms in the Personalized Medicine Research Project. | ||
| + | |OA=1 | ||
}} | }} | ||
| Line 42: | Line 52: | ||
|PMID=21359226 | |PMID=21359226 | ||
|Title=The genomic ancestry of individuals from different geographical regions of Brazil is more uniform than expected. | |Title=The genomic ancestry of individuals from different geographical regions of Brazil is more uniform than expected. | ||
| + | |OA=1 | ||
| + | }} | ||
| + | {{PMID Auto | ||
| + | |PMID=24756984 | ||
| + | |Title=Genetic polymorphisms in the microRNA binding-sites of the thymidylate synthase gene predict risk and survival in gastric cancer | ||
| + | }} | ||
| + | |||
| + | {{PMID Auto | ||
| + | |PMID=29369772 | ||
| + | |Title=Polymorphisms in folate metabolism genes are associated with susceptibility to presbycusis. | ||
}} | }} | ||
| + | {{on chip | 23andMe v5}} | ||
| + | {{on chip | Ancestry v2}} | ||
| + | {{on chip | Ancestry v2d}} | ||
Latest revision as of 09:58, 7 December 2019
| Orientation | minus |
| Stabilized | minus |
| Make rs16430(-;-) |
| Make rs16430(-;AATTTC) |
| Make rs16430(AATTTC;AATTTC) |
| Reference | GRCh37.p5 37.3/137 |
| Chromosome | 18 |
| Position | 673444 |
| Gene | ENOSF1, TYMS |
| is a | snp |
| is | mentioned by |
| dbSNP | rs16430 |
| dbSNP (classic) | rs16430 |
| ClinGen | rs16430 |
| ebi | rs16430 |
| HLI | rs16430 |
| Exac | rs16430 |
| Gnomad | rs16430 |
| Varsome | rs16430 |
| LitVar | rs16430 |
| Map | rs16430 |
| PheGenI | rs16430 |
| Biobank | rs16430 |
| 1000 genomes | rs16430 |
| hgdp | rs16430 |
| ensembl | rs16430 |
| geneview | rs16430 |
| scholar | rs16430 |
| rs16430 | |
| pharmgkb | rs16430 |
| gwascentral | rs16430 |
| openSNP | rs16430 |
| 23andMe | rs16430 |
| SNPshot | rs16430 |
| SNPdbe | rs16430 |
| MSV3d | rs16430 |
| GWAS Ctlg | rs16430 |
| Status | Deleted |
| Max Magnitude | 0 |
Note: as of Nov. 2013, this SNP is under review at dbSNP.
[PMID 23404871] Thymidylate synthase polymorphisms and risks of human orofacial clefts
[PMID 24166930
] Genetic variant rs16430 6bp > 0bp at the microRNA-binding site in TYMS and risk of sporadic breast cancer risk in non-hispanic white women aged ≤55 years
[PMID 17659576] Genetic polymorphisms in the methylenetetrahydrofolate reductase and thymidylate synthase genes and risk of hepatocellular carcinoma.
[PMID 18669903] Green tea intake, MTHFR/TYMS genotype and breast cancer risk: the Singapore Chinese Health Study.
[PMID 19379518] Development of a fingerprinting panel using medically relevant polymorphisms.
[PMID 20565774] Population based allele frequencies of disease associated polymorphisms in the Personalized Medicine Research Project.
[PMID 21359226] The genomic ancestry of individuals from different geographical regions of Brazil is more uniform than expected.
[PMID 24756984] Genetic polymorphisms in the microRNA binding-sites of the thymidylate synthase gene predict risk and survival in gastric cancer
[PMID 29369772] Polymorphisms in folate metabolism genes are associated with susceptibility to presbycusis.
