rs10200894
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs10200894(C;C) |
| Make rs10200894(C;G) |
| Make rs10200894(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 227952416 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10200894 |
| dbSNP (classic) | rs10200894 |
| ClinGen | rs10200894 |
| ebi | rs10200894 |
| HLI | rs10200894 |
| Exac | rs10200894 |
| Gnomad | rs10200894 |
| Varsome | rs10200894 |
| LitVar | rs10200894 |
| Map | rs10200894 |
| PheGenI | rs10200894 |
| Biobank | rs10200894 |
| 1000 genomes | rs10200894 |
| hgdp | rs10200894 |
| ensembl | rs10200894 |
| geneview | rs10200894 |
| scholar | rs10200894 |
| rs10200894 | |
| pharmgkb | rs10200894 |
| gwascentral | rs10200894 |
| openSNP | rs10200894 |
| 23andMe | rs10200894 |
| SNPshot | rs10200894 |
| SNPdbe | rs10200894 |
| MSV3d | rs10200894 |
| GWAS Ctlg | rs10200894 |
| GMAF | 0.1754 |
| Max Magnitude | 0 |
| ? | (C;C) (C;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs10200894 | |
|---|---|
| PubMed | [PMID 16252231 ]
|
| Affy Probeset | SNP_A-8385601 |
| Affy Orientation | same |
| On GW 5.0 | |
| Alleles A/B | C/G |
| Ancestral | C |
| Population | |
| Allele | C |
| Case Freq. | 0.93 |
| Control Freq. | 0.87 |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.84 |
| Disease | Parkinson's disease (PKD) |
rs10200894 increases susceptibility to Parkinson's disease 1.84 times for carriers of the C allele [PMID 16252231]
[PMID 16685661] Genomewide association, Parkinson disease, and PARK10.
[PMID 16685662] No evidence for association with Parkinson disease for 13 single-nucleotide polymorphisms identified by whole-genome association screening.
[PMID 16685663] A case-control association study of the 12 single-nucleotide polymorphisms implicated in Parkinson disease by a recent genome scan.
