rs10399805
| Orientation | plus |
| Stabilized | plus |
| Make rs10399805(A;A) |
| Make rs10399805(A;G) |
| Make rs10399805(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 203186870 |
| Gene | CHI3L1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10399805 |
| dbSNP (classic) | rs10399805 |
| ClinGen | rs10399805 |
| ebi | rs10399805 |
| HLI | rs10399805 |
| Exac | rs10399805 |
| Gnomad | rs10399805 |
| Varsome | rs10399805 |
| LitVar | rs10399805 |
| Map | rs10399805 |
| PheGenI | rs10399805 |
| Biobank | rs10399805 |
| 1000 genomes | rs10399805 |
| hgdp | rs10399805 |
| ensembl | rs10399805 |
| geneview | rs10399805 |
| scholar | rs10399805 |
| rs10399805 | |
| pharmgkb | rs10399805 |
| gwascentral | rs10399805 |
| openSNP | rs10399805 |
| 23andMe | rs10399805 |
| SNPshot | rs10399805 |
| SNPdbe | rs10399805 |
| MSV3d | rs10399805 |
| GWAS Ctlg | rs10399805 |
| GMAF | 0.2778 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
- 375 case and 812 control subjects
- rs10399805 p = .018 and rs2275351; p = .008.
[PMID 18767121] An attempt to repeat the association between rs10399805 and risk for schizophrenia in an ethnically identical population (Japanese) as well as a new population (Han Chinese) failed to show any significant association.
[PMID 19106306] rs10399805(T;T) genotype showed a 2.5-fold increase in CHI3L1 mRNA expression in peripheral blood cells than those with (C;C) which is associated with the risk of atopy.
[PMID 20051317] The chitinase 3-like 1 gene and schizophrenia: Evidence from a multi-center case-control study and meta-analysis
[PMID 17160890
] Functional variants in the promoter region of Chitinase 3-like 1 (CHI3L1) and susceptibility to schizophrenia.
[PMID 18403759] Effect of variation in CHI3L1 on serum YKL-40 level, risk of asthma, and lung function.
[PMID 19568425] Association of polymorphisms of the CHI3L1 gene with asthma and atopy: a populations-based study of 6514 Danish adults.
[PMID 21257319] Genetic polymorphisms in chitinase 3-like 1 (CHI3L1) are associated with circulating YKL-40 levels, but not with angiographic coronary artery disease in a Chinese population.
[PMID 25203433] Correlation of Chitinase 3-Like 1 Single Nucleotide Polymorphisms and Haplotypes with Uterine Cervical Cancer in Taiwanese Women
[PMID 27193312] CHI3L1 polymorphisms, cord blood YKL-40 levels and later asthma development.
[PMID 33280245] Association of CHI3L1 gene variants with YKL-40 levels and hypertension incidence: A population-based nested case-control study in China.
