rs1057520900
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;T) | 6.3 | PTEN hamartoma tumor syndrome |
(T;T) | 0 | common/normal |
Make rs1057520900(G;G) |
Reference | GRCh38.p7 38.3/150 |
Chromosome | 10 |
Position | 87957893 |
Gene | PTEN |
is a | snp |
is | mentioned by |
dbSNP | rs1057520900 |
dbSNP (classic) | rs1057520900 |
ClinGen | rs1057520900 |
ebi | rs1057520900 |
HLI | rs1057520900 |
Exac | rs1057520900 |
Gnomad | rs1057520900 |
Varsome | rs1057520900 |
LitVar | rs1057520900 |
Map | rs1057520900 |
PheGenI | rs1057520900 |
Biobank | rs1057520900 |
1000 genomes | rs1057520900 |
hgdp | rs1057520900 |
ensembl | rs1057520900 |
geneview | rs1057520900 |
scholar | rs1057520900 |
rs1057520900 | |
pharmgkb | rs1057520900 |
gwascentral | rs1057520900 |
openSNP | rs1057520900 |
23andMe | rs1057520900 |
SNPshot | rs1057520900 |
SNPdbe | rs1057520900 |
MSV3d | rs1057520900 |
GWAS Ctlg | rs1057520900 |
Max Magnitude | 6.3 |
PTEN gene, c.675T>G (p.Tyr225Ter); pathogenic in ClinVar for PTEN hamartoma tumor syndrome
note c.675T>C is likely to be a benign variant according to ClinVar
ClinVar | |
---|---|
Risk | rs1057520900(C;C) rs1057520900(G;G) |
Alt | rs1057520900(C;C) rs1057520900(G;G) |
Reference | Rs1057520900(T;T) |
Significance | Pathogenic |
Disease | not specified PTEN hamartoma tumor syndrome not provided |
Variation | info |
Gene | PTEN |
CLNDBN | not specified PTEN hamartoma tumor syndrome not provided |
Reversed | 0 |
HGVS | NC_000010.10:g.89717650T>C; NC_000010.10:g.89717650T>G |
CLNSRC | |
CLNACC | RCV000442557.1, RCV000457859.1, RCV000484536.1, |