rs1057520900
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;T) | 6.3 | PTEN hamartoma tumor syndrome |
| (T;T) | 0 | common/normal |
| Make rs1057520900(G;G) |
| Reference | GRCh38.p7 38.3/150 |
| Chromosome | 10 |
| Position | 87957893 |
| Gene | PTEN |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1057520900 |
| dbSNP (classic) | rs1057520900 |
| ClinGen | rs1057520900 |
| ebi | rs1057520900 |
| HLI | rs1057520900 |
| Exac | rs1057520900 |
| Gnomad | rs1057520900 |
| Varsome | rs1057520900 |
| LitVar | rs1057520900 |
| Map | rs1057520900 |
| PheGenI | rs1057520900 |
| Biobank | rs1057520900 |
| 1000 genomes | rs1057520900 |
| hgdp | rs1057520900 |
| ensembl | rs1057520900 |
| geneview | rs1057520900 |
| scholar | rs1057520900 |
| rs1057520900 | |
| pharmgkb | rs1057520900 |
| gwascentral | rs1057520900 |
| openSNP | rs1057520900 |
| 23andMe | rs1057520900 |
| SNPshot | rs1057520900 |
| SNPdbe | rs1057520900 |
| MSV3d | rs1057520900 |
| GWAS Ctlg | rs1057520900 |
| Max Magnitude | 6.3 |
PTEN gene, c.675T>G (p.Tyr225Ter); pathogenic in ClinVar for PTEN hamartoma tumor syndrome
note c.675T>C is likely to be a benign variant according to ClinVar
| ClinVar | |
|---|---|
| Risk | rs1057520900(C;C) rs1057520900(G;G) |
| Alt | rs1057520900(C;C) rs1057520900(G;G) |
| Reference | Rs1057520900(T;T) |
| Significance | Pathogenic |
| Disease | not specified PTEN hamartoma tumor syndrome not provided |
| Variation | info |
| Gene | PTEN |
| CLNDBN | not specified PTEN hamartoma tumor syndrome not provided |
| Reversed | 0 |
| HGVS | NC_000010.10:g.89717650T>C; NC_000010.10:g.89717650T>G |
| CLNSRC | |
| CLNACC | RCV000442557.1, RCV000457859.1, RCV000484536.1, |
