rs10985112
From SNPedia
					| Orientation | plus | 
| Stabilized | plus | 
| Geno | Mag | Summary | 
|---|---|---|
| (G;G) | 0 | common in complete genomics | 
| Make rs10985112(A;A) | 
| Make rs10985112(A;G) | 
| Reference | GRCh38 38.1/141 | 
| Chromosome | 9 | 
| Position | 120969130 | 
| Gene | C5 | 
| is a | snp | 
| is | mentioned by | 
| dbSNP | rs10985112 | 
| dbSNP (classic) | rs10985112 | 
| ClinGen | rs10985112 | 
| ebi | rs10985112 | 
| HLI | rs10985112 | 
| Exac | rs10985112 | 
| Gnomad | rs10985112 | 
| Varsome | rs10985112 | 
| LitVar | rs10985112 | 
| Map | rs10985112 | 
| PheGenI | rs10985112 | 
| Biobank | rs10985112 | 
| 1000 genomes | rs10985112 | 
| hgdp | rs10985112 | 
| ensembl | rs10985112 | 
| geneview | rs10985112 | 
| scholar | rs10985112 | 
| rs10985112 | |
| pharmgkb | rs10985112 | 
| gwascentral | rs10985112 | 
| openSNP | rs10985112 | 
| 23andMe | rs10985112 | 
| SNPshot | rs10985112 | 
| SNPdbe | rs10985112 | 
| MSV3d | rs10985112 | 
| GWAS Ctlg | rs10985112 | 
| GMAF | 0.1552 | 
| Max Magnitude | 0 | 
| ? | (A;A) (A;G) (G;G) | 28 | 
|---|---|---|
| 
 
 
  | ||
| Rs10985112 | |
|---|---|
| PubMed | [PMID 17880261 | 
| Affy Probeset | SNP_A-4241423 | 
| Affy Orientation | same | 
| On GW 5.0 | 1 | 
| Alleles A/B | A/G | 
| Ancestral | A | 
| Population | Caucasian | 
| Allele | A | 
| Case Freq. | 0.1 | 
| Control Freq. | 0.07 | 
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.57 | 
| Disease | Rheumatoid Arthritis (RA) | 
rs10985112 increases susceptibility to Rheumatoid Arthritis 1.57 times for carriers of the A allele [PMID 17880261
]
[PMID 20018075
] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
| ClinVar | |
|---|---|
| Risk | rs10985112(A;A) | 
| Alt | rs10985112(A;A) | 
| Reference | Rs10985112(G;G) | 
| Significance | Non-pathogenic | 
| Disease | not specified | 
| Variation | info | 
| Gene | C5 | 
| CLNDBN | not specified | 
| Reversed | 0 | 
| HGVS | NC_000009.11:g.123731408G>A | 
| CLNSRC | |
| CLNACC | RCV000456091.1, | 
Categories: 
- Is a snp
 - In dbSNP
 - SNPs on chromosome 9
 - Has genotype
 - Has population
 - Has Report GE
 - On chip 23andMe v1
 - On chip 23andMe v2
 - On chip 23andMe v3
 - On chip 23andMe v4
 - On chip Affy GenomeWide 6
 - On chip Affy500k
 - On chip Ancestry v2
 - On chip FTDNA2
 - On chip HumanOmni1Quad
 - On chip Illumina Human 1M
 - On chip 23andMe v5
 - On chip Ancestry v2c
 - On chip Ancestry v2d
 
