rs11045818
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| Make rs11045818(A;A) |
| Make rs11045818(A;G) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 12 |
| Position | 21176827 |
| Gene | SLCO1B1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11045818 |
| dbSNP (classic) | rs11045818 |
| ClinGen | rs11045818 |
| ebi | rs11045818 |
| HLI | rs11045818 |
| Exac | rs11045818 |
| Gnomad | rs11045818 |
| Varsome | rs11045818 |
| LitVar | rs11045818 |
| Map | rs11045818 |
| PheGenI | rs11045818 |
| Biobank | rs11045818 |
| 1000 genomes | rs11045818 |
| hgdp | rs11045818 |
| ensembl | rs11045818 |
| geneview | rs11045818 |
| scholar | rs11045818 |
| rs11045818 | |
| pharmgkb | rs11045818 |
| gwascentral | rs11045818 |
| openSNP | rs11045818 |
| 23andMe | rs11045818 |
| SNPshot | rs11045818 |
| SNPdbe | rs11045818 |
| MSV3d | rs11045818 |
| GWAS Ctlg | rs11045818 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19901119 |
| Trait | Methotrexate phramacokinetics (acute lymphoblastic leukemia) |
| Title | Germline genetic variation in an organic anion transporter polypeptide associated with methotrexate pharmacokinetics and clinical effects. |
| Risk Allele | G |
| P-val | 7E-7 |
| Odds Ratio | 9.30 [5.7-12.9] mL/min/m2 decrease |
| ClinVar | |
|---|---|
| Risk | rs11045818(A;A) |
| Alt | rs11045818(A;A) |
| Reference | Rs11045818(G;G) |
| Significance | Probable-non-pathogenic |
| Disease | Rotor syndrome |
| Variation | info |
| Gene | SLCO1B1 |
| CLNDBN | Rotor syndrome |
| Reversed | 0 |
| HGVS | NC_000012.11:g.21329761G>A |
| CLNSRC | |
| CLNACC | RCV000310218.1, |
