rs11214077
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (A;G) | 1 | classified as benign variant in ClinVar |
| (G;G) | 1 | most likely a benign genotype according to ClinVar (although rare) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 112087953 |
| Gene | SDHD, TIMM8B |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11214077 |
| dbSNP (classic) | rs11214077 |
| ClinGen | rs11214077 |
| ebi | rs11214077 |
| HLI | rs11214077 |
| Exac | rs11214077 |
| Gnomad | rs11214077 |
| Varsome | rs11214077 |
| LitVar | rs11214077 |
| Map | rs11214077 |
| PheGenI | rs11214077 |
| Biobank | rs11214077 |
| 1000 genomes | rs11214077 |
| hgdp | rs11214077 |
| ensembl | rs11214077 |
| geneview | rs11214077 |
| scholar | rs11214077 |
| rs11214077 | |
| pharmgkb | rs11214077 |
| gwascentral | rs11214077 |
| openSNP | rs11214077 |
| 23andMe | rs11214077 |
| SNPshot | rs11214077 |
| SNPdbe | rs11214077 |
| MSV3d | rs11214077 |
| GWAS Ctlg | rs11214077 |
| GMAF | 0.009183 |
| Max Magnitude | 1 |
aka c.149A>G, p.His50Arg or H50R
Classified as benign in ClinVar. Somewhat rare (~0.5%) allele frequency, but nowhere near as rare as the 1:100,000 incidence of the rare cancers cited in the OMIM entry for this variant.
| ClinVar | |
|---|---|
| Risk | Rs11214077(G;G) |
| Alt | Rs11214077(G;G) |
| Reference | Rs11214077(A;A) |
| Significance | Other |
| Disease | Carcinoid tumor of intestine Pheochromocytoma Merkel cell carcinoma not provided not specified Hereditary cancer-predisposing syndrome Cowden syndrome 3 Paraganglioma and gastric stromal sarcoma Paragangliomas 1 |
| Variation | info |
| Gene | TIMM8B SDHD |
| CLNDBN | Carcinoid tumor of intestine Pheochromocytoma Merkel cell carcinoma not provided not specified Hereditary cancer-predisposing syndrome Cowden syndrome 3 Paraganglioma and gastric stromal sarcoma Paragangliomas 1 |
| Reversed | 0 |
| HGVS | NC_000011.9:g.111958677A>G |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000007318.5, RCV000023207.6, RCV000023208.7, RCV000034696.1, RCV000122007.2, RCV000129149.2, RCV000144513.3, RCV000204331.3, RCV000238643.1, |
