rs11867581
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs11867581(A;A) |
| Make rs11867581(A;G) |
| Make rs11867581(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 30295210 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11867581 |
| dbSNP (classic) | rs11867581 |
| ClinGen | rs11867581 |
| ebi | rs11867581 |
| HLI | rs11867581 |
| Exac | rs11867581 |
| Gnomad | rs11867581 |
| Varsome | rs11867581 |
| LitVar | rs11867581 |
| Map | rs11867581 |
| PheGenI | rs11867581 |
| Biobank | rs11867581 |
| 1000 genomes | rs11867581 |
| hgdp | rs11867581 |
| ensembl | rs11867581 |
| geneview | rs11867581 |
| scholar | rs11867581 |
| rs11867581 | |
| pharmgkb | rs11867581 |
| gwascentral | rs11867581 |
| openSNP | rs11867581 |
| 23andMe | rs11867581 |
| SNPshot | rs11867581 |
| SNPdbe | rs11867581 |
| MSV3d | rs11867581 |
| GWAS Ctlg | rs11867581 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
Based on [PMID 21670732
] with 2823 samples a haplotype of A+A in rs2129785+rs11867581 predicts short allele of 5-HTTLPR with good accuracy. Haplotype G+G has not been generally observed, so phase can always be determined. The only possible haplotypes are thus A+A short 91% of the time, A+G long 96% of the time and G+A always long. [PMID 22504458] uses regression model over eight SNP's available on Illumina microarray with higher expected accuracy.
