rs119451946
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | Carrier of an early-onset Parkinson's mutation |
| (T;T) | 8.9 | Parkinson's disease, type 6, early-onset; likely |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 20648577 |
| Gene | PINK1, PINK1-AS |
| is a | snp |
| is | mentioned by |
| dbSNP | rs119451946 |
| dbSNP (classic) | rs119451946 |
| ClinGen | rs119451946 |
| ebi | rs119451946 |
| HLI | rs119451946 |
| Exac | rs119451946 |
| Gnomad | rs119451946 |
| Varsome | rs119451946 |
| LitVar | rs119451946 |
| Map | rs119451946 |
| PheGenI | rs119451946 |
| Biobank | rs119451946 |
| 1000 genomes | rs119451946 |
| hgdp | rs119451946 |
| ensembl | rs119451946 |
| geneview | rs119451946 |
| scholar | rs119451946 |
| rs119451946 | |
| pharmgkb | rs119451946 |
| gwascentral | rs119451946 |
| openSNP | rs119451946 |
| 23andMe | rs119451946 |
| SNPshot | rs119451946 |
| SNPdbe | rs119451946 |
| MSV3d | rs119451946 |
| GWAS Ctlg | rs119451946 |
| Max Magnitude | 8.9 |
c.1196C>T (p.Pro399Leu)
23andMe calls this i5003745
| ClinVar | |
|---|---|
| Risk | Rs119451946(T;T) |
| Alt | Rs119451946(T;T) |
| Reference | Rs119451946(C;C) |
| Significance | Pathogenic |
| Disease | Parkinson disease Parkinson Disease |
| Variation | info |
| Gene | PINK1-AS PINK1 |
| CLNDBN | Parkinson disease, autosomal recessive early-onset, digenic, PINK1/DJ1 Parkinson Disease, Recessive |
| Reversed | 0 |
| HGVS | NC_000001.10:g.20975070C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000002518.2, RCV000372794.1, |
