rs12079081
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs12079081(A;A) |
| Make rs12079081(A;G) |
| Make rs12079081(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 184284867 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs12079081 |
| dbSNP (classic) | rs12079081 |
| ClinGen | rs12079081 |
| ebi | rs12079081 |
| HLI | rs12079081 |
| Exac | rs12079081 |
| Gnomad | rs12079081 |
| Varsome | rs12079081 |
| LitVar | rs12079081 |
| Map | rs12079081 |
| PheGenI | rs12079081 |
| Biobank | rs12079081 |
| 1000 genomes | rs12079081 |
| hgdp | rs12079081 |
| ensembl | rs12079081 |
| geneview | rs12079081 |
| scholar | rs12079081 |
| rs12079081 | |
| pharmgkb | rs12079081 |
| gwascentral | rs12079081 |
| openSNP | rs12079081 |
| 23andMe | rs12079081 |
| SNPshot | rs12079081 |
| SNPdbe | rs12079081 |
| MSV3d | rs12079081 |
| GWAS Ctlg | rs12079081 |
| GMAF | 0.2553 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs12079081 | |
|---|---|
| PubMed | [PMID 17876339] |
| Affy Probeset | SNP_A-1851396 |
| Affy Orientation | reverse |
| On GW 5.0 | 1 |
| Alleles A/B | C/T |
| Ancestral | G |
| Population | |
| Allele | G |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | 1.20 |
| Odds Ratio Hom | 1.70 |
| Odds Ratio All | |
| Disease | Prostate cancer (PC) |
rs12079081 is in linkage disequilibrium with a polymorphism that increases susceptibility to Prostate cancer 1.20 times for heterozygotes (AG) and 1.70 times for homozygotes (GG) [PMID 17876339]
