rs12153855
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs12153855(C;C) |
| Make rs12153855(C;T) |
| Make rs12153855(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 32107027 |
| Gene | TNXB |
| is a | snp |
| is | mentioned by |
| dbSNP | rs12153855 |
| dbSNP (classic) | rs12153855 |
| ClinGen | rs12153855 |
| ebi | rs12153855 |
| HLI | rs12153855 |
| Exac | rs12153855 |
| Gnomad | rs12153855 |
| Varsome | rs12153855 |
| LitVar | rs12153855 |
| Map | rs12153855 |
| PheGenI | rs12153855 |
| Biobank | rs12153855 |
| 1000 genomes | rs12153855 |
| hgdp | rs12153855 |
| ensembl | rs12153855 |
| geneview | rs12153855 |
| scholar | rs12153855 |
| rs12153855 | |
| pharmgkb | rs12153855 |
| gwascentral | rs12153855 |
| openSNP | rs12153855 |
| 23andMe | rs12153855 |
| SNPshot | rs12153855 |
| SNPdbe | rs12153855 |
| MSV3d | rs12153855 |
| GWAS Ctlg | rs12153855 |
| GMAF | 0.1097 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22694956 ]
|
| Trait | |
| Title | Genome-wide association study of age-related macular degeneration identifies associated variants in the TNXB-FKBPL-NOTCH4 region of chromosome 6p21.3. |
| Risk Allele | C |
| P-val | 1E-9 |
| Odds Ratio | 1.4400 None |
| GWAS snp | |
|---|---|
| PMID | [PMID 23886662]
|
| Trait | Atopic dermatitis |
| Title | A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis. |
| Risk Allele | T |
| P-val | 3E-14 |
| Odds Ratio | 1.58 [1.405-1.779] |
[PMID 15747258] A high-resolution linkage-disequilibrium map of the human major histocompatibility complex and first generation of tag single-nucleotide polymorphisms.
