rs13689
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 0 | common in clinvar |
| Make rs13689(C;C) |
| Make rs13689(C;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 68834619 |
| Gene | CDH1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs13689 |
| dbSNP (classic) | rs13689 |
| ClinGen | rs13689 |
| ebi | rs13689 |
| HLI | rs13689 |
| Exac | rs13689 |
| Gnomad | rs13689 |
| Varsome | rs13689 |
| LitVar | rs13689 |
| Map | rs13689 |
| PheGenI | rs13689 |
| Biobank | rs13689 |
| 1000 genomes | rs13689 |
| hgdp | rs13689 |
| ensembl | rs13689 |
| geneview | rs13689 |
| scholar | rs13689 |
| rs13689 | |
| pharmgkb | rs13689 |
| gwascentral | rs13689 |
| openSNP | rs13689 |
| 23andMe | rs13689 |
| SNPshot | rs13689 |
| SNPdbe | rs13689 |
| MSV3d | rs13689 |
| GWAS Ctlg | rs13689 |
| GMAF | 0.1731 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 22535324] CDH1 gene polymorphisms, plasma CDH1 levels and risk of gastric cancer in a Chinese population
[PMID 22330421] E-cadherin polymorphisms and susceptibility to arsenic-related skin lesions in West Bengal, India.
[PMID 25150394] Genetic variation of the E-cadherin gene is associated with primary infertility in patients with ovarian endometriosis
| ClinVar | |
|---|---|
| Risk | rs13689(A;A) rs13689(C;C) rs13689(G;G) |
| Alt | rs13689(A;A) rs13689(C;C) rs13689(G;G) |
| Reference | Rs13689(T;T) |
| Significance | Non-pathogenic |
| Disease | Hereditary diffuse gastric cancer |
| Variation | info |
| Gene | CDH1 |
| CLNDBN | Hereditary diffuse gastric cancer |
| Reversed | 0 |
| HGVS | NC_000016.9:g.68868522T>C |
| CLNSRC | |
| CLNACC | RCV000375550.1, |
[PMID 30405831
] Genetic polymorphisms in CDH1 are associated with endometrial carcinoma susceptibility among Chinese Han women.
