rs138726443
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 4 | Ichthyosis vulgaris (dry, scaly skin) |
(G;G) | 0 | common in clinvar |
Make rs138726443(A;A) |
Reference | GRCh38.p7 38.3/149 |
Chromosome | 1 |
Position | 152307547 |
Gene | FLG |
is a | snp |
is | mentioned by |
dbSNP | rs138726443 |
dbSNP (classic) | rs138726443 |
ClinGen | rs138726443 |
ebi | rs138726443 |
HLI | rs138726443 |
Exac | rs138726443 |
Gnomad | rs138726443 |
Varsome | rs138726443 |
LitVar | rs138726443 |
Map | rs138726443 |
PheGenI | rs138726443 |
Biobank | rs138726443 |
1000 genomes | rs138726443 |
hgdp | rs138726443 |
ensembl | rs138726443 |
geneview | rs138726443 |
scholar | rs138726443 |
rs138726443 | |
pharmgkb | rs138726443 |
gwascentral | rs138726443 |
openSNP | rs138726443 |
23andMe | rs138726443 |
SNPshot | rs138726443 |
SNPdbe | rs138726443 |
MSV3d | rs138726443 |
GWAS Ctlg | rs138726443 |
Max Magnitude | 4 |
aka c.7339C>T (p.Arg2447Ter or R2447X)
Dominantly inherited variant pathogenic for ichthyosis vulgaris in ClinVar, and also associated with higher odds of eczema (OR 1.96, CI:1.69-2.27).[PMID 30665703]
ClinVar | |
---|---|
Risk | rs138726443(A;A) rs138726443(C;C) rs138726443(T;T) |
Alt | rs138726443(A;A) rs138726443(C;C) rs138726443(T;T) |
Reference | Rs138726443(G;G) |
Significance | Pathogenic |
Disease | not provided |
Variation | info |
Gene | FLG |
CLNDBN | not provided |
Reversed | 0 |
HGVS | NC_000001.10:g.152280023G>A |
CLNSRC | |
CLNACC | RCV000255655.2, |