rs138726443
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;G) | 4 | Ichthyosis vulgaris (dry, scaly skin) |
| (G;G) | 0 | common in clinvar |
| Make rs138726443(A;A) |
| Reference | GRCh38.p7 38.3/149 |
| Chromosome | 1 |
| Position | 152307547 |
| Gene | FLG |
| is a | snp |
| is | mentioned by |
| dbSNP | rs138726443 |
| dbSNP (classic) | rs138726443 |
| ClinGen | rs138726443 |
| ebi | rs138726443 |
| HLI | rs138726443 |
| Exac | rs138726443 |
| Gnomad | rs138726443 |
| Varsome | rs138726443 |
| LitVar | rs138726443 |
| Map | rs138726443 |
| PheGenI | rs138726443 |
| Biobank | rs138726443 |
| 1000 genomes | rs138726443 |
| hgdp | rs138726443 |
| ensembl | rs138726443 |
| geneview | rs138726443 |
| scholar | rs138726443 |
| rs138726443 | |
| pharmgkb | rs138726443 |
| gwascentral | rs138726443 |
| openSNP | rs138726443 |
| 23andMe | rs138726443 |
| SNPshot | rs138726443 |
| SNPdbe | rs138726443 |
| MSV3d | rs138726443 |
| GWAS Ctlg | rs138726443 |
| Max Magnitude | 4 |
aka c.7339C>T (p.Arg2447Ter or R2447X)
Dominantly inherited variant pathogenic for ichthyosis vulgaris in ClinVar, and also associated with higher odds of eczema (OR 1.96, CI:1.69-2.27).[PMID 30665703
]
| ClinVar | |
|---|---|
| Risk | rs138726443(A;A) rs138726443(C;C) rs138726443(T;T) |
| Alt | rs138726443(A;A) rs138726443(C;C) rs138726443(T;T) |
| Reference | Rs138726443(G;G) |
| Significance | Pathogenic |
| Disease | not provided |
| Variation | info |
| Gene | FLG |
| CLNDBN | not provided |
| Reversed | 0 |
| HGVS | NC_000001.10:g.152280023G>A |
| CLNSRC | |
| CLNACC | RCV000255655.2, |
