rs1545985
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | normal risk |
| (A;G) | somewhat higher risk for prostate cancer | |
| (G;G) | somewhat higher risk for prostate cancer | |
| (T;T) | 0 |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 45963986 |
| Gene | FYCO1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1545985 |
| dbSNP (classic) | rs1545985 |
| ClinGen | rs1545985 |
| ebi | rs1545985 |
| HLI | rs1545985 |
| Exac | rs1545985 |
| Gnomad | rs1545985 |
| Varsome | rs1545985 |
| LitVar | rs1545985 |
| Map | rs1545985 |
| PheGenI | rs1545985 |
| Biobank | rs1545985 |
| 1000 genomes | rs1545985 |
| hgdp | rs1545985 |
| ensembl | rs1545985 |
| geneview | rs1545985 |
| scholar | rs1545985 |
| rs1545985 | |
| pharmgkb | rs1545985 |
| gwascentral | rs1545985 |
| openSNP | rs1545985 |
| 23andMe | rs1545985 |
| SNPshot | rs1545985 |
| SNPdbe | rs1545985 |
| MSV3d | rs1545985 |
| GWAS Ctlg | rs1545985 |
| GMAF | 0.1919 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
rs1545985 is one of seven SNPs found in a combined study of over 1,000 patients to be associated with increased risk for prostate cancer. The risk allele for this SNP is (G); and while the odds ratio was not specifically reported, the probability of false significance (not permuted though) was given as p=6.6 x 10e-6, using an additive model of risk.[PMID 18073375]
