rs1559085
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 0 |
| Make rs1559085(C;C) |
| Make rs1559085(C;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 96742998 |
| Gene | CAST |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1559085 |
| dbSNP (classic) | rs1559085 |
| ClinGen | rs1559085 |
| ebi | rs1559085 |
| HLI | rs1559085 |
| Exac | rs1559085 |
| Gnomad | rs1559085 |
| Varsome | rs1559085 |
| LitVar | rs1559085 |
| Map | rs1559085 |
| PheGenI | rs1559085 |
| Biobank | rs1559085 |
| 1000 genomes | rs1559085 |
| hgdp | rs1559085 |
| ensembl | rs1559085 |
| geneview | rs1559085 |
| scholar | rs1559085 |
| rs1559085 | |
| pharmgkb | rs1559085 |
| gwascentral | rs1559085 |
| openSNP | rs1559085 |
| 23andMe | rs1559085 |
| SNPshot | rs1559085 |
| SNPdbe | rs1559085 |
| MSV3d | rs1559085 |
| GWAS Ctlg | rs1559085 |
| GMAF | 0.06566 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
rs1559085 is a SNP in the calpastatin CAST gene.
A significant association (p = 0.0167) between Parkinson's disease and rs1559085 was found in an analysis of the Center for Inherited Disease Research's (CIDR) genome-wide association study in familial PD.
[PMID 20127884
]
[PMID 18985386] Genomewide association study for susceptibility genes contributing to familial Parkinson disease.
