rs1561570

Orientation

plus

Stabilized

plus

Make rs1561570(C;C)

Make rs1561570(C;T)

Make rs1561570(T;T)

Reference

GRCh38 38.1/142

Chromosome

10

Position

13113726

Gene

OPTN

is a	snp
is	mentioned by
dbSNP	rs1561570
dbSNP (classic)	rs1561570
ClinGen	rs1561570
ebi	rs1561570
HLI	rs1561570
Exac	rs1561570
Gnomad	rs1561570
Varsome	rs1561570
LitVar	rs1561570
Map	rs1561570
PheGenI	rs1561570
Biobank	rs1561570
1000 genomes	rs1561570
hgdp	rs1561570
ensembl	rs1561570
geneview	rs1561570
scholar	rs1561570
google	rs1561570
pharmgkb	rs1561570
gwascentral	rs1561570
openSNP	rs1561570
23andMe	rs1561570
SNPshot	rs1561570
SNPdbe	rs1561570
MSV3d	rs1561570
GWAS Ctlg	rs1561570

GMAF

0.4518

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

related to Paget’s disease of bone 23andMe blog.

GWAS snp
PMID	[PMID 20436471]
Trait	Paget's disease
Title	Genome-wide association study identifies variants at CSF1, OPTN and TNFRSF11A as genetic risk factors for Paget's disease of bone
Risk Allele
P-val	6E-13
Odds Ratio	1.54 [1.37-1.72]

OMIM	602080
Desc
Variant
Related	also

GWAS snp
PMID	[PMID 21623375]
Trait
Title	Genome-wide association identifies three new susceptibility loci for Paget's disease of bone.
Risk Allele	T
P-val	4E-38
Odds Ratio	1.6700 [1.54-1.80]

[PMID 22796589] Genetic association study of UCMA/GRP and OPTN genes (PDB6 locus) with Paget's disease of bone.