rs15869
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| Make rs15869(A;C) |
| Make rs15869(C;C) |
| Reference | GRCh38.p2 38.2/146 |
| Chromosome | 13 |
| Position | 32398875 |
| Gene | BRCA2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs15869 |
| dbSNP (classic) | rs15869 |
| ClinGen | rs15869 |
| ebi | rs15869 |
| HLI | rs15869 |
| Exac | rs15869 |
| Gnomad | rs15869 |
| Varsome | rs15869 |
| LitVar | rs15869 |
| Map | rs15869 |
| PheGenI | rs15869 |
| Biobank | rs15869 |
| 1000 genomes | rs15869 |
| hgdp | rs15869 |
| ensembl | rs15869 |
| geneview | rs15869 |
| scholar | rs15869 |
| rs15869 | |
| pharmgkb | rs15869 |
| gwascentral | rs15869 |
| openSNP | rs15869 |
| 23andMe | rs15869 |
| SNPshot | rs15869 |
| SNPdbe | rs15869 |
| MSV3d | rs15869 |
| GWAS Ctlg | rs15869 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
[PMID 26711789
] A variant at a potentially functional microRNA-binding site in BRIP1 was associated with risk of squamous cell carcinoma of the head and neck.
| ClinVar | |
|---|---|
| Risk | rs15869(C;C) |
| Alt | rs15869(C;C) |
| Reference | Rs15869(A;A) |
| Significance | Non-pathogenic |
| Disease | Breast-ovarian cancer Fanconi anemia Hereditary breast and ovarian cancer syndrome |
| Variation | info |
| Gene | BRCA2 |
| CLNDBN | Breast-ovarian cancer, familial 2 Fanconi anemia Hereditary breast and ovarian cancer syndrome |
| Reversed | 0 |
| HGVS | NC_000013.10:g.32973012A>C |
| CLNSRC | Breast Cancer Information Core (BRCA2) |
| CLNACC | RCV000112856.2, RCV000273093.1, RCV000328172.1, |
