rs16953002
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 1.5 | 1.32x increased risk of melanoma in those with low BMI |
| (A;G) | 1.2 | 1.16x increased risk of melanoma in indiiduals with low BMI |
| (G;G) | 1 | Slightly lower risk of melanoma in individuals with low BMI |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 54080912 |
| Gene | FTO |
| is a | snp |
| is | mentioned by |
| dbSNP | rs16953002 |
| dbSNP (classic) | rs16953002 |
| ClinGen | rs16953002 |
| ebi | rs16953002 |
| HLI | rs16953002 |
| Exac | rs16953002 |
| Gnomad | rs16953002 |
| Varsome | rs16953002 |
| LitVar | rs16953002 |
| Map | rs16953002 |
| PheGenI | rs16953002 |
| Biobank | rs16953002 |
| 1000 genomes | rs16953002 |
| hgdp | rs16953002 |
| ensembl | rs16953002 |
| geneview | rs16953002 |
| scholar | rs16953002 |
| rs16953002 | |
| pharmgkb | rs16953002 |
| gwascentral | rs16953002 |
| openSNP | rs16953002 |
| 23andMe | rs16953002 |
| SNPshot | rs16953002 |
| SNPdbe | rs16953002 |
| MSV3d | rs16953002 |
| GWAS Ctlg | rs16953002 |
| GMAF | 0.2057 |
| Max Magnitude | 1.5 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23455637 |
| Trait | Melanoma |
| Title | A variant in FTO shows association with melanoma risk not due to BMI. |
| Risk Allele | A |
| P-val | 4E-12 |
| Odds Ratio | 1.16 [1.11-1.20] |
