rs1789924
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs1789924(C;C) |
| Make rs1789924(C;T) |
| Make rs1789924(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 99353129 |
| Gene | ADH1C |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1789924 |
| dbSNP (classic) | rs1789924 |
| ClinGen | rs1789924 |
| ebi | rs1789924 |
| HLI | rs1789924 |
| Exac | rs1789924 |
| Gnomad | rs1789924 |
| Varsome | rs1789924 |
| LitVar | rs1789924 |
| Map | rs1789924 |
| PheGenI | rs1789924 |
| Biobank | rs1789924 |
| 1000 genomes | rs1789924 |
| hgdp | rs1789924 |
| ensembl | rs1789924 |
| geneview | rs1789924 |
| scholar | rs1789924 |
| rs1789924 | |
| pharmgkb | rs1789924 |
| gwascentral | rs1789924 |
| openSNP | rs1789924 |
| 23andMe | rs1789924 |
| SNPshot | rs1789924 |
| SNPdbe | rs1789924 |
| MSV3d | rs1789924 |
| GWAS Ctlg | rs1789924 |
| GMAF | 0.2424 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21437268 ]
|
| Trait | |
| Title | A Genome-Wide Association Study of Upper Aerodigestive Tract Cancers Conducted within the INHANCE Consortium |
| Risk Allele | C |
| P-val | 3E-7 |
| Odds Ratio | 1.1200 [1.07-1.17] |
[PMID 17273965] Evidence of positive selection on a class I ADH locus.
[PMID 19193628] ADH single nucleotide polymorphism associations with alcohol metabolism in vivo.
[PMID 19298322] Associations and interactions between SNPs in the alcohol metabolizing genes and alcoholism phenotypes in European Americans.
[PMID 23430454] Genetic variants at 4q21, 4q23 and 12q24 are associated with esophageal squamous cell carcinoma risk in a Chinese population
